Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1 113 2e-19 >seq1 Length=4294417 Score = 113 bits (124), Expect = 2e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||||||||| || || || || || || ||||| || || || || || Sbjct 3810511 ATGCAGATATTCGTTAAAACCCTCACGGGAAAGACGATCACTCTCGAAGTGGAGTCTTCG 3810570 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | | || || ||||| ||||||||||| ||||||||||||||| Sbjct 3810571 GACACCATTGACAATGTGAAGTCCAAGATTCAGGATAAGGAAGGTATTCCTCCTGATCAA 3810630 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || || || || | || || || ||||| || || || ||| | | || || ||| Sbjct 3810631 CAGCGATTGATCTTTGCTGGTAAGCAGCTTGAGGACGGTAGGACTCTCTCTGACTACAAT 3810690 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 || | ||||| | || |||||| | || || Sbjct 3810691 ATCCAGAAGGAATCCACGCTTCACCTTGTCTT 3810722 Score = 104 bits (114), Expect = 9e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||||||||| || || || ||||| || ||||| ||||| ||||| || || Sbjct 1826167 AATGCAGATTTTCGTTAAGACCCTCACGGGTAAGACCATTACCCTTGAGGTTGAGTCCTC 1826226 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||||| | | || || || || || ||||| ||||| || || ||||| Sbjct 1826227 GGACACTATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCGGATCA 1826286 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| ||||| |||||| | || || || || || ||||| | ||| | | || || || Sbjct 1826287 ACAGCGTTTGATTTTCGCCGGTAAGCAGCTCGAGGATGGCCGCACTCTTTCTGACTACAA 1826346 Query 391229 TATTGATAAGGATGCAACACTTCAC 391253 ||| | ||||| | || || ||| Sbjct 1826347 CATTCAGAAGGAGTCCACCCTCCAC 1826371 Score = 98.7 bits (108), Expect = 4e-15 Identities = 144/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297 |||||||| || || || || | ||||||||| || ||||| || | || ||| | Sbjct 1864443 TTTGCTCCCGAGGAGATCTCGGCCATGGTTCTTGGCAAGATGAAGGAGATCGCCGAAGAT 1864384 Query 451298 TATATTGGTTCTCCAGTT-ACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGC 451356 ||| ||||| | | || | ||| |||| || ||||||| || || || ||||||||||| Sbjct 1864383 TATCTTGGT-CACAAGGTCACTCATGCGGTGGTTACTGTCCCTGCGTACTTCAATGATGC 1864325 Query 451357 ACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTAT 451416 || || || || || || ||||| ||| |||| | ||||| | ||| | || || | Sbjct 1864324 CCAGCGCCAGGCCACCAAGGATGCCGGAACTATTTCCGGTTTGACTGTCATGCGTGTTGT 1864265 Query 451417 TAATGAACCTACAGCAGCTGC 451437 ||||| || || || ||||| Sbjct 1864264 CAATGAGCCAACCGCTGCTGC 1864244 Score = 89.7 bits (98), Expect = 2e-12 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 501084 CATGCGGATATATTTGATTTTTTGGAACTACGAAAAAATACTGGTGCCGAATCAGAAAGA 501143 ||||| |||||||| || ||||| || || |||||||| |||| ||| | Sbjct 927169 CATGCAGATATATTGGACTTTTTAGATCTTAGAAAAAATCATGGTAAAGAAGAGCTCCGT 927110 Query 501144 GCCCGTGATTTATTTTTAGCATTATGGGTTTCTGACTTATTTATGAATCAGGTTAAATTA 501203 || ||||||||||| | ||||||||||| | || || || ||||| | ||| | | Sbjct 927109 GCTCGTGATTTATTCTATGCATTATGGGTCCCAGATTTGTTCATGAAAAAAGTTGATGCA 927050 Query 501204 AATAATGATTGGTATTTATTTTGTCCAGACAAAGCACCAGGATTAAATGA-TGTATATGG 501262 || | || ||||| |||||| ||||||||| || ||| ||||||| ||| | ||| Sbjct 927049 GATGAGGAGTGGTACTTATTTAGTCCAGACACTGCCCCATATCTAAATGATTGTGT-TGG 926991 Query 501263 AGATGAATATGAAACTCTTTATTGGAAATATGT 501295 || || | ||| | || || | ||| ||||| Sbjct 926990 TGAGGAGTTTGATTCACTCTACTCGAAGTATGT 926958 Score = 84.2 bits (92), Expect = 9e-11 Identities = 92/120 (77%), Gaps = 2/120 (2%) Strand=Plus/Minus Query 502346 AAATGAAATGAAAAAATATGGAACTAGA-AACAGTTTGCTTACAGCACTAATGCCAACAG 502404 ||| ||| |||||||||||||| |||| ||| |||||||| ||| ||||||| || | Sbjct 926333 AAAAGAAGTGAAAAAATATGGA-CTAGCGAACTCATTGCTTACTGCAGTAATGCCTACTG 926275 Query 502405 CATCTACATCTCAACTATTAGGCAATTATGAATCATTTGAACCATTTACTTCTAATATAT 502464 |||||||||| ||| || |||| ||| ||| | || ||||| || || ||||||| Sbjct 926274 CATCTACATCCCAAATACTAGGTAATACGGAAAGTGTGGAGCCATTGACCTCGAATATAT 926215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717919036052