Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 4e-15 seq1 87.8 2e-12 >seq2 Length=2231275 Score = 96.9 bits (106), Expect = 4e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 102174 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 102233 ||||||||||| || |||| |||||| ||||||| |||||||| ||| || ||| Sbjct 2160651 TTTGCTGAGCGTCTTGTCGCTTTTGCGGCCATTGAGGGCGTCTTCTTCAGTGGGTCTTTC 2160592 Query 102234 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 102293 | |||| ||||||||||| || ||||||||||| || || ||||| || ||| Sbjct 2160591 GCATCCATTTTCTGGCTCAAGAAACGTGGTCTCATGCCTGGGCTGACGTTCTCTAATGAG 2160532 Query 102294 CTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 || ||||| || || ||||| | ||| || ||||| Sbjct 2160531 CTCATCTCACGAGATGAGGGTATGCACACCGATTTTGC 2160494 >seq1 Length=4294417 Score = 87.8 bits (96), Expect = 2e-12 Identities = 271/414 (65%), Gaps = 14/414 (3%) Strand=Plus/Minus Query 112059 AACCAAGGTGATGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGA 112117 || || ||| | || ||| | | |||| || ||| | |||| || | ||| | ||||| Sbjct 927133 AATCATGGTAAAGAAGAG-CTCCGTGCTCGTGATTTATTCTATGCATTATGGGTCCCAGA 927075 Query 112118 TCTCTTCATGAAGAGAGTTGAGG-AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGG 112176 | | |||||||| | |||||| | ||| || | |||| | ||| ||||||||| | Sbjct 927074 TTTGTTCATGAAAAAAGTTGATGCAGA-TGAGGAGTGGTACTTATTTAGTCCAGACACTG 927016 Query 112177 CACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGG 112236 | || ||| ||| || |||||||||||||| | |||||| | ||||| | | Sbjct 927015 CCCCATATCTAAATGATTGTGTTGGTGAGGAGTTTGATTCACTCTACTCGAAGTATGTTG 926956 Query 112237 AAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGT 112296 |||| || | ||| | |||||| | | ||| | |||||||| | Sbjct 926955 TGGAAAAGCGATTTAGATCGAAAATTCCAGCTAGAAAACTCTGGTATGCTATTCTTGATG 926896 Query 112297 CTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAG-- 112354 |||| | ||||| || | || | || |||||||| || || | |||| ||| Sbjct 926895 CTCAGATAGAGACAGGAAATCCGTCAATACTTTACAAGGATGC-----AGCAAATGAGAG 926841 Query 112355 ---TAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGA 112411 ||||||||||||||||| || ||||| || ||| | ||||| |||||| | || Sbjct 926840 ATCCAATCAAAAGAATTTGGGAGTAATCAAATCCTCAAACTTGTGTACTGAAATCATCGA 926781 Query 112412 ATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCC 112465 || | || || | || || || ||||| ||||| || |||||||| Sbjct 926780 ATACTCTTCGCCAGGAGAAATAGCAGTTTGCAACCTTGCATCTATAGCTCTCCC 926727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742252573680