Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq2 96.9 4e-15
seq1 87.8 2e-12
>seq2
Length=2231275
Score = 96.9 bits (106), Expect = 4e-15
Identities = 116/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 102174 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 102233
||||||||||| || |||| |||||| ||||||| |||||||| ||| || |||
Sbjct 2160651 TTTGCTGAGCGTCTTGTCGCTTTTGCGGCCATTGAGGGCGTCTTCTTCAGTGGGTCTTTC 2160592
Query 102234 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 102293
| |||| ||||||||||| || ||||||||||| || || ||||| || |||
Sbjct 2160591 GCATCCATTTTCTGGCTCAAGAAACGTGGTCTCATGCCTGGGCTGACGTTCTCTAATGAG 2160532
Query 102294 CTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
|| ||||| || || ||||| | ||| || |||||
Sbjct 2160531 CTCATCTCACGAGATGAGGGTATGCACACCGATTTTGC 2160494
>seq1
Length=4294417
Score = 87.8 bits (96), Expect = 2e-12
Identities = 271/414 (65%), Gaps = 14/414 (3%)
Strand=Plus/Minus
Query 112059 AACCAAGGTGATGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGA 112117
|| || ||| | || ||| | | |||| || ||| | |||| || | ||| | |||||
Sbjct 927133 AATCATGGTAAAGAAGAG-CTCCGTGCTCGTGATTTATTCTATGCATTATGGGTCCCAGA 927075
Query 112118 TCTCTTCATGAAGAGAGTTGAGG-AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGG 112176
| | |||||||| | |||||| | ||| || | |||| | ||| ||||||||| |
Sbjct 927074 TTTGTTCATGAAAAAAGTTGATGCAGA-TGAGGAGTGGTACTTATTTAGTCCAGACACTG 927016
Query 112177 CACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGG 112236
| || ||| ||| || |||||||||||||| | |||||| | ||||| | |
Sbjct 927015 CCCCATATCTAAATGATTGTGTTGGTGAGGAGTTTGATTCACTCTACTCGAAGTATGTTG 926956
Query 112237 AAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGT 112296
|||| || | ||| | |||||| | | ||| | |||||||| |
Sbjct 926955 TGGAAAAGCGATTTAGATCGAAAATTCCAGCTAGAAAACTCTGGTATGCTATTCTTGATG 926896
Query 112297 CTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAG-- 112354
|||| | ||||| || | || | || |||||||| || || | |||| |||
Sbjct 926895 CTCAGATAGAGACAGGAAATCCGTCAATACTTTACAAGGATGC-----AGCAAATGAGAG 926841
Query 112355 ---TAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGA 112411
||||||||||||||||| || ||||| || ||| | ||||| |||||| | ||
Sbjct 926840 ATCCAATCAAAAGAATTTGGGAGTAATCAAATCCTCAAACTTGTGTACTGAAATCATCGA 926781
Query 112412 ATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCC 112465
|| | || || | || || || ||||| ||||| || ||||||||
Sbjct 926780 ATACTCTTCGCCAGGAGAAATAGCAGTTTGCAACCTTGCATCTATAGCTCTCCC 926727
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742252573680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |