Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1 196 6e-45 seq2 93.3 5e-14 >seq1 Length=4294417 Score = 196 bits (216), Expect = 6e-45 Identities = 1059/1673 (63%), Gaps = 51/1673 (3%) Strand=Plus/Minus Query 109509 CTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCT 109568 ||| ||||| || || || | | || || || ||||| || || ||| ||| ||||| Sbjct 3285890 CTGTGACTGGTCAATATATGGGGCTCGCTCTGCTGCCATATCAATAATAGCCTTCTGGCT 3285831 Query 109569 AATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTG 109628 || |||||||| |||||||| | | || || |||||||| || | | || ||||| Sbjct 3285830 GATCTCCCAGACCGTCTTGTAAAGCTGTTTCATGTCATCGGGGATATTCCTGAGATTTTG 3285771 Query 109629 AATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTT 109688 ||| || ||||| | | | | ||| ||||| |||| ||| | ||| | | Sbjct 3285770 AATTGAACCACCCTCAGCAATTAGGCGATTTTTCATGTCTTCATTCCACAAACCCATGTC 3285711 Query 109689 TTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCG 109748 ||||| | | ||| | ||| || | || || || ||||| || || Sbjct 3285710 AACTAGATCTTTCAAAAGGTAGGGGTTCACGATTTGGAACTCTCCTGCAAGCACACGACG 3285651 Query 109749 GAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGT 109808 || | |||| || || || || ||||| ||||| || | || |||| || Sbjct 3285650 AGAATAAAGATTAGAGGTATAAGGCTCAAAACATTCATTAAATCCCAATATCTGTGACGT 3285591 Query 109809 GGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCG 109868 || || || ||||| ||||||| || || ||| || | ||| | | ||| || Sbjct 3285590 AGACGCAGTTGGCATCGGAGCCACAAGTAGTGAGTTACGCAAACCATAC----TTAGCCA 3285535 Query 109869 CTCACGCATTGCGTCCCAATCATAACGACCACTAAATT--TAGTCTCACCATCCCACATA 109926 | | | || || | ||| | ||| ||||| ||| ||||| | |||| | Sbjct 3285534 ATTTCTCCTTTAGTTC--ATCCCAGTT-CCA-TAAATCAGTAGGCTCACGACCCCATAGG 3285479 Query 109927 TCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACG-ACCCCTC 109985 || ||| | || ||||| | |||||| ||| | | || | ||||| | ||| | Sbjct 3285478 TCAAATTGCAATAAACCCTTGGAAGCAGGGCTACCTTCGTAAGTTTCGTAAGGACCAAAC 3285419 Query 109986 AACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATG 110045 ||||| |||| || | ||| ||||| || ||||| || || || || || || Sbjct 3285418 TCCCTCG-CCAATTCAACACTTGACTCGAGTGCGGCGTGATAAATTGTTTCGAATATCTG 3285360 Query 110046 AGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGAC----CACAAAGAATAAACA 110101 |||| | |||| ||| | ||| || ||||| | | ||||||| Sbjct 3285359 GATGTTCAGCTGTCGAGCCTCAGGGCTGTCAAATGGAAGGCGTAACTCAAAGAAAGTG-- 3285302 Query 110102 CATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAG 110161 || || | || |||||||| || |||| || || | ||||||||| || || | || Sbjct 3285301 --TCGGCCAACCCTTGAACACCTAGTGCAATTGGACGGTTCTTCATGTTTGAACGCCTAG 3285244 Query 110162 CAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCT 110221 | || || || || |||| || || || || || ||||||||| || | | | Sbjct 3285243 CTTCCTCCACAGGATAGTAGTTACGATCAATAACTCGGTTGAGATTCCGTGTGATGATTT 3285184 Query 110222 TCGTGATTTCATGGAGTTTGTCGTAATCGAAC--GTTTTCGTCTCCT-TA---TTGACAT 110275 | | | ||||| ||||| | | | || || | || | || || || | || Sbjct 3285183 TGGCCACATCATGAAGTTTTTGGAAGTCATACCAGATTCCATCACCAGTAGCTTCTACGA 3285124 Query 110276 ATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATT 110335 | || | || | ||| |||||||||||||| | |||||| ||| | | ||| | Sbjct 3285123 AACGCGGCAAGGCCAGAGAGGCAAGATTGCACACTGCAGTCTCCTCTGGGGACGAGTACT 3285064 Query 110336 CCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATT 110395 | | || || || | ||| || ||| || ||| | ||| | |||||| |||| Sbjct 3285063 CAACGATCTCGCAGCAAAGGTTTGATGACTTGATCGTACCAAGGTTTTGCTGATTAGATT 3285004 Query 110396 TGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGA 110455 || |||||| ||||||||||| ||||| ||||||| ||||| || || || | || | Sbjct 3285003 TGCGGTTGCAGGCATCCTTATACAGCATAAATGGGGTTCCAGTCTCAGTTTGAGCCTCTA 3284944 Query 110456 GAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGA-GACCTT---CCTCC 110511 ||||| | ||||| || | | | | | | | |||| ||||| ||||| Sbjct 3284943 TAATGGAATACCATA-----GCTTCTGAG-CTTTAATGGT-GCGACGACCTCTGCCCTCC 3284891 Query 110512 T---CGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTC 110568 | | || | || || | | || || |||| ||||| |||||||| ||||| | Sbjct 3284890 TTTTCATATGTCGTATAAAGTTTTTCGAACTCCTCACCGTAAACATCAGAGAGACC-TGG 3284832 Query 110569 GC-CTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAG 110627 || || | |||||| | || | ||| | ||| || | |||| || ||| || | Sbjct 3284831 GCACTCATTGGGACACATTAGAGTCCAGTCCCCATTATCTTTCACCCGCTGCATAAATAA 3284772 Query 110628 GTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTT 110687 ||| |||||||| | || ||||| |||||| |||| |||||| | ||| || || Sbjct 3284771 GTCGGGAATCCAAAGTGCAACGAAAATATCACGGGCACGAATCTCTTCCTTACCATGATT 3284712 Query 110688 GAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGAT 110747 ||| | || | || | ||||| ||||| || || | ||| | || | Sbjct 3284711 CTTGCGCACATCAATGGTATCAAAAATATCATCATGCCACGGCTCAATATACATCGCAAA 3284652 Query 110748 GGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGAC 110801 || || | | || ||| | |||| ||||||||| || || |||| |||| Sbjct 3284651 GGCACC---AGGTCGCTTGTTACCACCTTGGTCAACATAGCGAGCAGTATTATTGTAGAC 3284595 Query 110802 CCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATT 110861 | | ||| ||||||| |||| ||| |||||||||||| || || | Sbjct 3284594 ACGCAACATGGGAATAAGCCCATTGGAAGTACCATTTGTACCAGCGATGTAAGAGCCCGT 3284535 Query 110862 GGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA 110921 ||||||||||| ||| ||| | ||||| || || || ||| ||| ||||| Sbjct 3284534 GGCACGAATGTTGTGAATACTGAGGCCAATTCCTCCGGCATTCTTTGAAATCAAGGCACA 3284475 Query 110922 CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCA 110981 || |||| ||| |||| ||||||||||| ||| |||| | | | | ||||| Sbjct 3284474 TTCCTTGAGCGTATCATAGATACCATCAATACTATCATCCTTCATCGTTACCAAGAAGCA 3284415 Query 110982 AGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAA 111041 |||||||| || || || ||||| |||||| |||| || || | ||||||||||| Sbjct 3284414 GGAAGACATTTGTGGCTTTGGAGTTCCTGCATTGTAGAGGGTTGGACTGGCATGAATGAA 3284355 Query 111042 CAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAAT 111101 ||| |||||| | ||| || ||||| | | || | ||| | || || || Sbjct 3284354 GTATTTTTGTGACATCCATTGGTAGGTTTCGAGAACAGCTGGGATATCCTCGCCATGGAT 3284295 Query 111102 ACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCAT 111154 ||| | |||||||| ||| | ||| | ||||| |||| || ||| |||| Sbjct 3284294 ACCCACGGCAACTCTCATTATCATGTGCTGAGGTCTTTCCCATACCTTACCAT 3284242 >seq2 Length=2231275 Score = 93.3 bits (102), Expect = 5e-14 Identities = 134/186 (72%), Gaps = 5/186 (3%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 || ||||| || ||||||||||||||| ||| || ||||||||||| || | |||| Sbjct 2160512 CCCTCATCTCGTGAGATGAGCTCATTAGAGAACGTCAGCCCAGGCATGAGACCACGTTTC 2160571 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 || ||||| || |||| ||| ||| ||||||| |||||| | || ||| Sbjct 2160572 TTGAGCCAGAAAATGGATGCGAAAGACCCACTGAAGAAGACGCCCTCAATGGCCGCAAAA 2160631 Query 119634 GCGAATAGACGCTCAGCAAAAGGTCGAGACT-TGTC---GAACCACTTGAGAGCCCAGTT 119689 |||| ||||||||||||||| || | || |||| || ||| |||||||||| Sbjct 2160632 GCGACAAGACGCTCAGCAAAA-GTAACGTCTCTGTCGTTGATCCAGCGAAGAGCCCAGTC 2160690 Query 119690 GGCCTT 119695 |||||| Sbjct 2160691 GGCCTT 2160696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975860118200