Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 seq2 82.4 9e-11 >seq1 Length=4294417 Score = 87.8 bits (96), Expect = 2e-12 Identities = 184/272 (68%), Gaps = 12/272 (4%) Strand=Plus/Plus Query 9371 GGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAG 9430 ||| || |||||||||||||||||||| | || ||||| ||||| | ||| | Sbjct 2389630 GGCGTCTATCTCATCAATGAAGACAATGGAAGGGGCATTTTTCCGGGCCAAAGAAAACAA 2389689 Query 9431 ATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACA 9490 || || |||| | || || ||||| |||||||| || || || | | || | || Sbjct 2389690 GTCCCGCACCCGTGATGCACCTACACCGACAAACATTTCAACGAACTCAG-AGCCGCTCA 2389748 Query 9491 TTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9549 || | |||||| ||| || || || || | || || ||||| |||||||| | Sbjct 2389749 CTGAGTAGAAGGGCACACCAGCCTCGCCTGCGGTAGCCTTAGCCAGAAGCGTCTTACCAG 2389808 Query 9550 TACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCACTTCCAAA----- 9604 |||| || |||| || | |||||||| ||||| ||||| | ||||| Sbjct 2389809 TACCAGGTGGTCCCGAAAGTACAGCACCCCGGGGAATTTTGGCCC-----CCAAATGCTC 2389863 Query 9605 GTATCTCTCAGGTTGCTTGAGAAAATCCACAA 9636 |||| ||| || |||||||| ||||| |||| Sbjct 2389864 GTATTTCTGGGGATGCTTGAGGAAATCGACAA 2389895 >seq2 Length=2231275 Score = 82.4 bits (90), Expect = 9e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| | |||||||||||| || || || ||||| ||||| || || Sbjct 2160494 GCAAAATCGGTGTGCATACCCTCATCTCGTGAGATGAGCTCATTAGAGAACGTCAGCCCA 2160553 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 ||||||||||| || ||||| | ||| |||| | ||| ||||| |||||||| Sbjct 2160554 GGCATGAGACCACGTTTCTTGAGCCAGAAAATGGATGCGAAAGACCCACTGAAGAAGACG 2160613 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAA 117431 ||||| | |||||| || | ||| ||||| || || Sbjct 2160614 CCCTCAATGGCCGCAAAAGCGACAAGACGCTCAGCAAA 2160651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980659879560