Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq2 116 4e-21 >seq2 Length=2231275 Score = 116 bits (128), Expect = 4e-21 Identities = 190/269 (71%), Gaps = 6/269 (2%) Strand=Plus/Plus Query 153774 TTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAG 153833 ||||| | || |||||||| ||||| || ||||| || || |||||| | | || | Sbjct 659743 TTTGGCGTGCCCATGGGATACGGAGGACCACATGCAGCTTTTTTTGCAGCCAGGGATCAA 659802 Query 153834 TATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTA--GATAGTGAAGGTAATA 153891 | |||||| || ||||| |||||||||||| ||| | ||||| || ||| Sbjct 659803 TTCAAGAGACGAATTCCTGGAAGAATTGTAGGTA--TCACCAAGGATAGACTTGGAAATC 659860 Query 153892 AAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCA 153951 |||| || || || || | || || | || ||||||||||||||||| || || ||| Sbjct 659861 AAGCGTATAGGTTGGCCTTGCAAACACGCGAACAGCATATCAGGAGAGATAAGGCTACCT 659920 Query 153952 GTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTC-TATGCAGCATAT 154010 || || || || ||||| || ||||||| ||||| || || | | || ||| ||| Sbjct 659921 CGAATATTTGTACTGCTCAAGCCTTGCTGGCGAATATTTC-GGCTACGTACGCATGCTAT 659979 Query 154011 CATGGTGCAGATGGACTACATGCTATAGC 154039 |||||| | | |||||| || |||||| Sbjct 659980 CATGGTCCTCAAGGACTAACTGATATAGC 660008 Score = 111 bits (122), Expect = 2e-19 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 154949 TGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACC 155008 ||| || |||||||| | ||||| || ||| | ||||| || || || ||| | || Sbjct 660918 TGGCGGACAGGTATACATGGATGGCGCTAATATGAATGCGCAAGTTGGTCTAACTTCCCC 660977 Query 155009 ATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACA 155068 | || | || || || ||||| |||||||| |||| || |||||||||||||| || Sbjct 660978 TGGAGATTTAGGCGCTGACGTATGCCATCTAAATCTACACAAGACATTCTGTATTCCTCA 661037 Query 155069 TGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAAAACATCTCACACCAT 155124 || ||||| |||||||| || ||||| || |||| | |||||||| |||||| Sbjct 661038 CGGTGGTGGTGGTCCTGGAGTTGGTCCGGTATGTGTCGGCAAACATCTGTCACCAT 661093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212662436960