Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1 168 1e-36 seq2 129 1e-24 >seq1 Length=4294417 Score = 168 bits (186), Expect = 1e-36 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| ||||||||||| ||||| || || || |||||||| || | ||||| || || || Sbjct 3810723 CAAGACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGAGAGAGTCCTACCGTC 3810664 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 || ||||||||||| || ||||| | ||| ||||| || |||||||| ||||| || || Sbjct 3810663 CTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGGAATACCTTCCTTATC 3810604 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||||| || ||| || || ||||||||||||||| |||||||| || || | ||| Sbjct 3810603 CTGAATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCACTTCGAGAGTGATCGT 3810544 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||||| || | ||||| ||||| | ||||| Sbjct 3810543 CTTTCCCGTGAGGGTTTTAACGAATATCTGCAT 3810511 Score = 141 bits (156), Expect = 2e-28 Identities = 158/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || ||||| ||||| || | |||||| | ||||| ||| Sbjct 1826376 ACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCCTCG 1826317 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| ||||| || | || ||||| || || || || || || ||||| || Sbjct 1826316 AGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGGATTCCCTCCTTGTCCTGG 1826257 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || ||||| |||||||| || || |||||||||| ||||| Sbjct 1826256 ATCTTGGACTTGACATTGTCAATAGTGTCCGAGGACTCAACCTCAAGGGTAATGGTCTTA 1826197 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || || | || || ||||| | ||||||| Sbjct 1826196 CCCGTGAGGGTCTTAACGAAAATCTGCATTT 1826166 Score = 141 bits (156), Expect = 2e-28 Identities = 164/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||| | |||||| || || ||||||||||| || ||||| |||||||| | | ||| | Sbjct 3810501 GAGGCGCAAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGACAAAGTACG 3810442 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 ||||| || || |||||||| ||||| || | ||| || ||||| || ||||| || || Sbjct 3810441 GCCATCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGAATACCCTC 3810382 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||||| ||||| ||| ||| || || || || || ||||| ||||| || | ||| Sbjct 3810381 CTTGTCCTGAATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCACCTCCAAGGT 3810322 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 | |||||| || || ||||| || || || | ||||||| Sbjct 3810321 GATCGTCTTGCCGGTTAAAGTCTTCACAAAGATCTGCATTT 3810281 Score = 84.2 bits (92), Expect = 5e-11 Identities = 118/166 (71%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 160577 GCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGAC 160636 ||| | || |||||| || | |||| | |||| | || ||| || | |||||||| Sbjct 3284736 GCCCGTGATATTTTCGTTGCACTTTGGATTCCCGACTTATTTATGCAGCGGGTGAAAGAT 3284795 Query 160637 AATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGT 160696 |||||||| |||| || | ||||||||||| || || || ||||||||| ||| Sbjct 3284796 AATGGGGACTGGACTCTAATGTGTCCCAATGAGTGCCCAGGTCTCTCTGATGTTTACGGT 3284855 Query 160697 TCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAG 160742 |||||||| | |||||| | ||| ||||| ||||| |||| Sbjct 3284856 GAGGAGTTCGAAAAACTTTATACGACATATGAAAAGGAGGGCAGAG 3284901 >seq2 Length=2231275 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| |||||||| || || || ||||| || | || || | ||||| ||| Sbjct 1211831 ACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCCTCG 1211890 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| | || |||||||| || || || || || ||||| ||| Sbjct 1211891 AGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGA 1211950 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || ||||| ||||| || || |||||||||| ||||| Sbjct 1211951 ATCTTGCTCTTAACATTGTCGATGGTATCCGAGGACTCAACCTCAAGGGTAATGGTCTTA 1212010 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 1212011 CCCGTGAGTGTCTTGACGAAAATCTGCAT 1212039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481329910573