Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq1 168 1e-36
seq2 129 1e-24
>seq1
Length=4294417
Score = 168 bits (186), Expect = 1e-36
Identities = 165/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
||| ||||||||||| ||||| || || || |||||||| || | ||||| || || ||
Sbjct 3810723 CAAGACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGAGAGAGTCCTACCGTC 3810664
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
|| ||||||||||| || ||||| | ||| ||||| || |||||||| ||||| || ||
Sbjct 3810663 CTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGGAATACCTTCCTTATC 3810604
Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107
||||| || ||| || || ||||||||||||||| |||||||| || || | |||
Sbjct 3810603 CTGAATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCACTTCGAGAGTGATCGT 3810544
Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||||| || | ||||| ||||| | |||||
Sbjct 3810543 CTTTCCCGTGAGGGTTTTAACGAATATCTGCAT 3810511
Score = 141 bits (156), Expect = 2e-28
Identities = 158/211 (75%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || |||||||| || ||||| ||||| || | |||||| | ||||| |||
Sbjct 1826376 ACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCCTCG 1826317
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||||||||| ||||| || | || ||||| || || || || || || ||||| ||
Sbjct 1826316 AGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGGATTCCCTCCTTGTCCTGG 1826257
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||| || ||||| |||||||| || || |||||||||| |||||
Sbjct 1826256 ATCTTGGACTTGACATTGTCAATAGTGTCCGAGGACTCAACCTCAAGGGTAATGGTCTTA 1826197
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
|| || | || || ||||| | |||||||
Sbjct 1826196 CCCGTGAGGGTCTTAACGAAAATCTGCATTT 1826166
Score = 141 bits (156), Expect = 2e-28
Identities = 164/221 (74%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981
||| | |||||| || || ||||||||||| || ||||| |||||||| | | ||| |
Sbjct 3810501 GAGGCGCAAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGACAAAGTACG 3810442
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
||||| || || |||||||| ||||| || | ||| || ||||| || ||||| || ||
Sbjct 3810441 GCCATCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGAATACCCTC 3810382
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
||||| ||||| ||| ||| || || || || || ||||| ||||| || | |||
Sbjct 3810381 CTTGTCCTGAATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCACCTCCAAGGT 3810322
Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
| |||||| || || ||||| || || || | |||||||
Sbjct 3810321 GATCGTCTTGCCGGTTAAAGTCTTCACAAAGATCTGCATTT 3810281
Score = 84.2 bits (92), Expect = 5e-11
Identities = 118/166 (71%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 160577 GCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGAC 160636
||| | || |||||| || | |||| | |||| | || ||| || | ||||||||
Sbjct 3284736 GCCCGTGATATTTTCGTTGCACTTTGGATTCCCGACTTATTTATGCAGCGGGTGAAAGAT 3284795
Query 160637 AATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGT 160696
|||||||| |||| || | ||||||||||| || || || ||||||||| |||
Sbjct 3284796 AATGGGGACTGGACTCTAATGTGTCCCAATGAGTGCCCAGGTCTCTCTGATGTTTACGGT 3284855
Query 160697 TCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAG 160742
|||||||| | |||||| | ||| ||||| ||||| ||||
Sbjct 3284856 GAGGAGTTCGAAAAACTTTATACGACATATGAAAAGGAGGGCAGAG 3284901
>seq2
Length=2231275
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| |||||||| |||||||| || || || ||||| || | || || | ||||| |||
Sbjct 1211831 ACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCCTCG 1211890
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| | || |||||||| || || || || || ||||| |||
Sbjct 1211891 AGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGA 1211950
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| || || || ||||| ||||| || || |||||||||| |||||
Sbjct 1211951 ATCTTGCTCTTAACATTGTCGATGGTATCCGAGGACTCAACCTCAAGGGTAATGGTCTTA 1212010
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || ||||| | |||||
Sbjct 1212011 CCCGTGAGTGTCTTGACGAAAATCTGCAT 1212039
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481329910573
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |