Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 2e-15 seq1 89.7 3e-13 >seq2 Length=2231275 Score = 96.9 bits (106), Expect = 2e-15 Identities = 150/211 (71%), Gaps = 14/211 (7%) Strand=Plus/Plus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| || ||||| ||||| ||||| || ||| | || |||| || ||||| Sbjct 1211836 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCCTCGAGCTG 1211895 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 |||||||| || || | || || ||||| | || | ||||||||||| |||||| Sbjct 1211896 CTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTT 1211955 Query 34898 -CTGT-----TTGACGGATGCTAT-CGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || | ||| | |||| ||| ||| || |||||| || | ||| ||||| | Sbjct 1211956 GCTCTTAACATTGTC-GATGGTATCCGA------GGACTCAACCTCAAGGGTAATGGTCT 1212008 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | |||||||| ||||| || || |||||||| Sbjct 1212009 TACCCGTGAGTGTCTTGACGAAAATCTGCAT 1212039 >seq1 Length=4294417 Score = 89.7 bits (98), Expect = 3e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| ||||| | || |||| || ||||| || ||||| || Sbjct 1826358 TCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCGGCGAAA 1826299 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || || || || | || | ||||||||||| ||||| ||||| Sbjct 1826298 ATCAAACGCTGTTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 1826239 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || |||||| || | ||| ||||| || |||||||| ||||| || Sbjct 1826238 TCAATAGTGTCCGAGGACTCAACCTCAAGGGTAATGGTCTTACCCGTGAGGGTCTTAACG 1826179 Query 34971 AAGATCTGCATATT 34984 || |||||||| || Sbjct 1826178 AAAATCTGCATTTT 1826165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633524827032