Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq2 96.9 2e-15
seq1 89.7 3e-13
>seq2
Length=2231275
Score = 96.9 bits (106), Expect = 2e-15
Identities = 150/211 (71%), Gaps = 14/211 (7%)
Strand=Plus/Plus
Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837
||||| ||| || ||||| ||||| ||||| || ||| | || |||| || |||||
Sbjct 1211836 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCCTCGAGCTG 1211895
Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897
|||||||| || || | || || ||||| | || | ||||||||||| ||||||
Sbjct 1211896 CTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTT 1211955
Query 34898 -CTGT-----TTGACGGATGCTAT-CGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950
|| | ||| | |||| ||| ||| || |||||| || | ||| ||||| |
Sbjct 1211956 GCTCTTAACATTGTC-GATGGTATCCGA------GGACTCAACCTCAAGGGTAATGGTCT 1212008
Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| |||||||| ||||| || || ||||||||
Sbjct 1212009 TACCCGTGAGTGTCTTGACGAAAATCTGCAT 1212039
>seq1
Length=4294417
Score = 89.7 bits (98), Expect = 3e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||||||||| ||||| ||||| | || |||| || ||||| || ||||| ||
Sbjct 1826358 TCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCGGCGAAA 1826299
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| | || || || || | || | ||||||||||| ||||| |||||
Sbjct 1826298 ATCAAACGCTGTTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 1826239
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || || |||||| || | ||| ||||| || |||||||| ||||| ||
Sbjct 1826238 TCAATAGTGTCCGAGGACTCAACCTCAAGGGTAATGGTCTTACCCGTGAGGGTCTTAACG 1826179
Query 34971 AAGATCTGCATATT 34984
|| |||||||| ||
Sbjct 1826178 AAAATCTGCATTTT 1826165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633524827032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |