Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 8e-15
seq2 89.7 4e-12
>seq1
Length=4294417
Score = 98.7 bits (108), Expect = 8e-15
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325
||||| ||||| || ||| || |||||||| |||| ||||| || || |||
Sbjct 3810719 ACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGAGAGAGTCCTACCGTCCTCA 3810660
Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGA 563385
|| || || || ||||| || | || || |||||||||||||| ||||| ||||| |||
Sbjct 3810659 AGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGGAATACCTTCCTTATCCTGA 3810600
Query 563386 ATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTT 563444
|| || || || ||||| || || | || | || ||||||||| | || ||
Sbjct 3810599 ATCTTGGACTTCACATTGTCAATGGTGTCCG-AAGACTCCACTTCGAGAGTGATCGTCTT 3810541
Query 563445 ACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
|| || || ||||||||||| || ||||||
Sbjct 3810540 TCCCGTGAGGGTTTTAACGAATATCTGCATA 3810510
Score = 87.8 bits (96), Expect = 1e-11
Identities = 350/545 (64%), Gaps = 7/545 (1%)
Strand=Plus/Minus
Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050
|| ||||||||| ||||| || ||||| || ||||| ||||| ||| |||||
Sbjct 1864765 AGTTATAGGTATTGATTTGGGTACCACCTACTCCTGTGTAGGTGTCATGCAGCATGGTCG 1864706
Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110
|| || || |||||||| || || |||| | | | ||| ||| ||||||| | || |
Sbjct 1864705 TGTCGAGATCATTGCCAACGAACAGGGTAGCCGTATTACCCCAAGTTATGTTGCATTTAA 1864646
Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170
|| ||||| | | ||||||||||| || || |||| || | ||| || |||
Sbjct 1864645 CGATGGTGAACGTCTTGTTGGTGATGCTGCCAAGAATCAGGCAGCCTCTAACCCCCACAA 1864586
Query 550171 TACTATTTTTGATGCTAAACGTTTAAT-TGGAAGAAGTTTTAATGATTCGACTGTTCAGG 550229
|| | || || ||| ||| | || || |||| ||||| || ||| ||| |||
Sbjct 1864585 CACGGTGTTCGACATTAAGCGTATCATCGGGTTGAAG-TTTAACGACCCGAGTGTCCAGC 1864527
Query 550230 CAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG 550289
|||||||||| | || ||| | ||| ||| || || | | || |
Sbjct 1864526 GTGATATGAAGCGATTCCCATTCAAGGTTGCCGGCAAAAATGGCAAGCCAGTTGTGGAGG 1864467
Query 550290 CT-ACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTA 550348
| ||| | || | | || || ||| | || || | || || | |||||| |
Sbjct 1864466 TTGACT--TTAATG--GCGAGAAGCAGTTTGCTCCCGAGGAGATCTCGGCCATGGTTCTT 1864411
Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATA 550408
|| ||||| | | ||| | || | ||||||| | || || |||| || |
Sbjct 1864410 GGCAAGATGAAGGAGATCGCCGAAGATTATCTTGGTCACAAGGTCACTCATGCGGTGGTT 1864351
Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468
||||| || || || || ||||| | || || || || || || ||||| ||| ||||
Sbjct 1864350 ACTGTCCCTGCGTACTTCAATGATGCCCAGCGCCAGGCCACCAAGGATGCCGGAACTATT 1864291
Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528
| || | | ||| | ||| || ||||||| || || |||||||| | || || ||
Sbjct 1864290 TCCGGTTTGACTGTCATGCGTGTTGTCAATGAGCCAACCGCTGCTGCCATCGCTTACGGT 1864231
Query 550529 CTTGA 550533
|| ||
Sbjct 1864230 CTCGA 1864226
>seq2
Length=2231275
Score = 89.7 bits (98), Expect = 4e-12
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 390868 CCATCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGGATATAACCA 390927
|||||||||| || |||| ||||| || || || | |||||||||||||||
Sbjct 1627844 CCATCATACTGAACCATAATATCTTCCAATGCCTTGACAAGCCGTCTTTGGATATAACCT 1627785
Query 390928 GTGTCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGAAG 390987
|| |||||||| || | |||||||| ||| | |||||| | || ||||| | |||||
Sbjct 1627784 GTCTCTGCAGTCTTCACTGCAGTATCAATCAAACCTTCACGACCAGCCATGGCATGGAAA 1627725
Query 390988 AAAAATTCCATAGGATTGAGTCCA 391011
|| || ||| ||| ||||||||
Sbjct 1627724 AAGAACTCCTGGGGACTGAGTCCA 1627701
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029294995194310
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |