Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq1 127 2e-24
seq2 89.7 4e-13
>seq1
Length=4294417
Score = 127 bits (140), Expect = 2e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| ||||| || | ||| || ||| ||| || ||||| ||||||||||| | | | ||
Sbjct 3810500 AGGCGCAAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGACAAAGTACGG 3810441
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || || | |||||||| || || |||| |||||| || || | |||| ||||||
Sbjct 3810440 CCATCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGAATACCCTCC 3810381
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||||| || ||| | | | || || |||| ||||||||||| ||
Sbjct 3810380 TTGTCCTGAATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCACCTCCAAGGTG 3810321
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| || || || ||||| || ||||| ||||||||
Sbjct 3810320 ATCGTCTTGCCGGTTAAAGTCTTCACAAAGATCTGCAT 3810283
Score = 109 bits (120), Expect = 4e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| ||| | || || ||| ||| || ||||| ||||| ||||| ||| | ||
Sbjct 1826385 AGACGCAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGG 1826326
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || || | |||||||||||| || |||| ||||||||||||| ||| | ||||||
Sbjct 1826325 CCATCCTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGGATTCCCTCC 1826266
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || ||| | | || || || | ||| ||||| | |||
Sbjct 1826265 TTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCCGAGGACTCAACCTCAAGGGTA 1826206
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || ||||| | || || || |||||||||||
Sbjct 1826205 ATGGTCTTACCCGTGAGGGTCTTAACGAAAATCTGCAT 1826168
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598
||| || | || ||||| || | || |||||| || || || |||||||| |||||
Sbjct 3810738 GCCACCACGTAAACGCAAGACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGA 3810679
Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658
||| | | | |||| || | ||||||||| ||||| |||| |||||||||||| | ||
Sbjct 3810678 GAGAGTCCTACCGTCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGG 3810619
Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718
|| || ||||| || |||||| || ||| | | | || || | ||||||
Sbjct 3810618 AATACCTTCCTTATCCTGAATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCAC 3810559
Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| | || ||||| |||||||| | ||||| || || ||||||||
Sbjct 3810558 TTCGAGAGTGATCGTCTTTCCCGTGAGGGTTTTAACGAATATCTGCAT 3810511
>seq2
Length=2231275
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623
|| || ||| ||| || || || ||||| ||||| || | ||| | || || | ||||
Sbjct 1211837 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCCTCGAGCTGC 1211896
Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683
|| ||||| || |||| |||||||| || | ||| | ||||||||||| ||||||
Sbjct 1211897 TTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTG 1211956
Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743
|| ||| | | | || || | ||| ||||| | ||||| || || |||||
Sbjct 1211957 CTCTTAACATTGTCGATGGTATCCGAGGACTCAACCTCAAGGGTAATGGTCTTACCCGTG 1212016
Query 48744 AAAGTTTTTACAAAAATCTGCATC 48767
| || || || ||||||||||||
Sbjct 1212017 AGTGTCTTGACGAAAATCTGCATC 1212040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380937511789137
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |