Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2 113 8e-20 seq1 93.3 8e-14 >seq2 Length=2231275 Score = 113 bits (124), Expect = 8e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 ||| ||||| || |||||| || || || || ||||||| | || ||||| || Sbjct 2160490 GCATGCAAAATCGGTGTGCATACCCTCATCTCGTGAGATGAGCTCATTAGAGAACGTCAG 2160549 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 |||||||||| || | | |||||||||||||| | |||||||| ||| |||||| Sbjct 2160550 CCCAGGCATGAGACCACGTTTCTTGAGCCAGAAAATGGATGCGAAAGACCCACTGAAGAA 2160609 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 || |||||| | ||||| || ||| || | ||| | |||| | ||| |||| Sbjct 2160610 GACGCCCTCAATGGCCGCAAAAGCGACAAGACGCTCAGCAAAAGTAACGTCTCTGTCGTT 2160669 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTT 48339 ||||||| ||| |||||||| |||||||| Sbjct 2160670 GATCCAGCGAAGAGCCCAGTCGGCCTTCTT 2160699 >seq1 Length=4294417 Score = 93.3 bits (102), Expect = 8e-14 Identities = 233/350 (67%), Gaps = 7/350 (2%) Strand=Plus/Minus Query 213779 GGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGAC 213838 ||||||||| || |||||||||| | |||| | || | |||||| || | ||| || | Sbjct 3284822 GGGACACATTAGAGTCCAGTCCCCATTATCTTTCACCCGCTGCATAAATAAGTCGGGAAT 3284763 Query 213839 CCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAG 213898 ||| || || ||| | || | || | |||| ||| ||| || ||||||| Sbjct 3284762 CCAAAGTGCAACGAAAATATCACGGGCACGAATCTCTTCCTTACCATGATTCTTGCGCAC 3284703 Query 213899 ATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGG 213958 ||| | ||||| || || | ||||||||||| || || || |||||||| || || Sbjct 3284702 ATCAATGGTATCAAAAATATCATCATGCCACGGCTCAATATACATCGCAAAGGCACCAGG 3284643 Query 213959 CCTCTTG---CCGCCCTGGTCCAC-CAGCCTGGCCACCA-TGTTGAAGATGCGCAGGACG 214013 | |||| || || ||||| || ||| | || | | ||| ||| |||| | | Sbjct 3284642 TCGCTTGTTACCACCTTGGTCAACATAGC--GAGCAGTATTATTGTAGACACGCAACATG 3284585 Query 214014 GGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGG 214073 || | ||||| ||||| || || || || || || || ||||| | ||| | | | Sbjct 3284584 GGAATAAGCCCATTGGAAGTACCATTTGTACCAGCGATGTAAGAGCCCGTGGCACGAATG 3284525 Query 214074 TTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCA 214123 ||| || ||| || || || ||||| | ||| || |||| ||| || Sbjct 3284524 TTGTGAATACTGAGGCCAATTCCTCCGGCATTCTTTGAAATCAAGGCACA 3284475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532578760960