Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq2 114 2e-20
seq1 113 8e-20
>seq2
Length=2231275
Score = 114 bits (126), Expect = 2e-20
Identities = 354/532 (67%), Gaps = 23/532 (4%)
Strand=Plus/Minus
Query 25513 TGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTC-TATCCAA 25571
||||||||||| ||||| || |||| ||||||| | ||| |||| | || ||| ||
Sbjct 2161011 TGGACCGCCGAGGAGATCGACCTGGGCAAGGACCTTCACGACTGGGAACATCGTATG-AA 2160953
Query 25572 AGACGAGCAGCATTTTCTCAAGTAC---GTGTTGGCATTCTTTGCAGCCTCTGATGGTAT 25628
| || | | || | ||| | | ||| | || || || || || || || |||||
Sbjct 2160952 TGCTGATGAACGTTATTTCATTTCCCGTGTGCTTGCCTTTTTCGCGGCATCCGACGGTAT 2160893
Query 25629 AGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTG 25688
|| ||||| || || | | |||| || || ||| | ||||| |||||
Sbjct 2160892 CGTCAACGAAAACTTGGTACAAAATTTCAGTGACGACGTCCAGATCCCCGAGGCTAAGTG 2160833
Query 25689 TTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT 25748
|| || || |||||||| || || ||| | ||||||||| ||| | || |
Sbjct 2160832 CTTTTATGGCTTCCAGATAATGATTGAGAATATCCACTCTGAGACGTACTCACTACTAAT 2160773
Query 25749 -GATGACGTACATTACAGACGTCGCCGAGAGAG---ATCGGCTGTTTGGTGCCATCGAGC 25804
||| || || |||| || || | ||| || || ||||| ||| |||||
Sbjct 2160772 TGAT-ACCTATATTAAGGA--TCCCAAAGA-AGCTAATTATTTGTTTAATGCAATCGATA 2160717
Query 25805 ACATA---CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGA 25861
|||| |||| | ||||| |||| ||||| | ||||||||| | ||||
Sbjct 2160716 ACATTGGGCCCATCCGCAAGA---AGGCCGACTGGGCTCTTCGCTGGATCAAC-GACAGA 2160661
Query 25862 G-CGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGC 25920
| || ||| |||| ||||| || || || ||||| || | |||||| |||| |||||
Sbjct 2160660 GACGTTACTTTTGCTGAGCGTCTTGTCGCTTTTGCGGCCATTGAGGGCGTCTTCTTCAGT 2160601
Query 25921 GGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTT 25979
|| || || || |||| |||||||||||| | | | || | |||||| |||||| ||
Sbjct 2160600 GGGTCTTTCGCATCCATTTTCTGGCTCAAG-AAACGTGGTCTCATGCCTGGGCTGACGTT 2160542
Query 25980 TTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGC 26031
|| || ||||||||| | || |||||| | |||| |||||||| |||
Sbjct 2160541 CTCTAATGAGCTCATCTCACGAGATGAGGGTATGCACACCGATTTTGCATGC 2160490
>seq1
Length=4294417
Score = 113 bits (124), Expect = 8e-20
Identities = 301/454 (66%), Gaps = 7/454 (2%)
Strand=Plus/Minus
Query 221750 TACTGTATGATCTCTGTACAGAGGTT-GCTGCACTTGATGGTCCCCAGGTGATTGTGATT 221808
|||| | |||||| || ||||| | || ||||||| || || |||| | |||||
Sbjct 3285067 TACTCAACGATCTCGCAGCAAAGGTTTGATG-ACTTGATCGTACCAAGGTTTTGCTGATT 3285009
Query 221809 AGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGC 221868
||| ||||| ||| || ||||| || |||||||| || |||||||| |||||
Sbjct 3285008 AGATTTGCGGTTGCAGGCATCCTTATACAGCATAAATGGGGTTCCAGTCTCAGTTTGAGC 3284949
Query 221869 CACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGG 221927
| | | ||| | ||| || | |||| || | | || | || |||||
Sbjct 3284948 CTCTATAATGGAATACCATAGCT-TCTGAGCTTTAATGGTGCGACGACCTCTGCCCTC-- 3284892
Query 221928 TCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTG 221987
||||||||| ||||| || | || |||| |||||||| | || || ||||
Sbjct 3284891 -CTTTTCATATGTCGTATAAAGTTTTTCGAACTCCTCACCGTAAACATCAGAGAGACCTG 3284833
Query 221988 GACACCTGGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGA 222047
| ||| ||||||||| ||| |||||| | || ||||| |||| |||||| || |
Sbjct 3284832 GGCACTCATTGGGACACATTAGAGTCCAGTCCCCATTATCTTTCACCCGCTGCATAAATA 3284773
Query 222048 GGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGT 222107
||| || ||||| || || || | ||| | || || ||| ||| || | |
Sbjct 3284772 AGTCGGGAATCCAAAGTGCAACGAAAATATCACGGGCACGAATCTCTTCCTTACCATGAT 3284713
Query 222108 TTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCA 222167
| || | || ||| | |||||||| ||| | ||||||||||| | ||| | || |
Sbjct 3284712 TCTTGCGCACATCAATGGTATCAAAAATATCATCATGCCACGGCTCAATATACATCGCAA 3284653
Query 222168 GAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201
|| || ||||||||||| ||||| || || ||
Sbjct 3284652 AGGCACCAGGTCGCTTGTTACCACCTTGGTCAAC 3284619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844579399360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |