Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2 114 2e-20 seq1 113 8e-20 >seq2 Length=2231275 Score = 114 bits (126), Expect = 2e-20 Identities = 354/532 (67%), Gaps = 23/532 (4%) Strand=Plus/Minus Query 25513 TGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTC-TATCCAA 25571 ||||||||||| ||||| || |||| ||||||| | ||| |||| | || ||| || Sbjct 2161011 TGGACCGCCGAGGAGATCGACCTGGGCAAGGACCTTCACGACTGGGAACATCGTATG-AA 2160953 Query 25572 AGACGAGCAGCATTTTCTCAAGTAC---GTGTTGGCATTCTTTGCAGCCTCTGATGGTAT 25628 | || | | || | ||| | | ||| | || || || || || || || ||||| Sbjct 2160952 TGCTGATGAACGTTATTTCATTTCCCGTGTGCTTGCCTTTTTCGCGGCATCCGACGGTAT 2160893 Query 25629 AGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTG 25688 || ||||| || || | | |||| || || ||| | ||||| ||||| Sbjct 2160892 CGTCAACGAAAACTTGGTACAAAATTTCAGTGACGACGTCCAGATCCCCGAGGCTAAGTG 2160833 Query 25689 TTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT 25748 || || || |||||||| || || ||| | ||||||||| ||| | || | Sbjct 2160832 CTTTTATGGCTTCCAGATAATGATTGAGAATATCCACTCTGAGACGTACTCACTACTAAT 2160773 Query 25749 -GATGACGTACATTACAGACGTCGCCGAGAGAG---ATCGGCTGTTTGGTGCCATCGAGC 25804 ||| || || |||| || || | ||| || || ||||| ||| ||||| Sbjct 2160772 TGAT-ACCTATATTAAGGA--TCCCAAAGA-AGCTAATTATTTGTTTAATGCAATCGATA 2160717 Query 25805 ACATA---CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGA 25861 |||| |||| | ||||| |||| ||||| | ||||||||| | |||| Sbjct 2160716 ACATTGGGCCCATCCGCAAGA---AGGCCGACTGGGCTCTTCGCTGGATCAAC-GACAGA 2160661 Query 25862 G-CGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGC 25920 | || ||| |||| ||||| || || || ||||| || | |||||| |||| ||||| Sbjct 2160660 GACGTTACTTTTGCTGAGCGTCTTGTCGCTTTTGCGGCCATTGAGGGCGTCTTCTTCAGT 2160601 Query 25921 GGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTT 25979 || || || || |||| |||||||||||| | | | || | |||||| |||||| || Sbjct 2160600 GGGTCTTTCGCATCCATTTTCTGGCTCAAG-AAACGTGGTCTCATGCCTGGGCTGACGTT 2160542 Query 25980 TTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGC 26031 || || ||||||||| | || |||||| | |||| |||||||| ||| Sbjct 2160541 CTCTAATGAGCTCATCTCACGAGATGAGGGTATGCACACCGATTTTGCATGC 2160490 >seq1 Length=4294417 Score = 113 bits (124), Expect = 8e-20 Identities = 301/454 (66%), Gaps = 7/454 (2%) Strand=Plus/Minus Query 221750 TACTGTATGATCTCTGTACAGAGGTT-GCTGCACTTGATGGTCCCCAGGTGATTGTGATT 221808 |||| | |||||| || ||||| | || ||||||| || || |||| | ||||| Sbjct 3285067 TACTCAACGATCTCGCAGCAAAGGTTTGATG-ACTTGATCGTACCAAGGTTTTGCTGATT 3285009 Query 221809 AGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGC 221868 ||| ||||| ||| || ||||| || |||||||| || |||||||| ||||| Sbjct 3285008 AGATTTGCGGTTGCAGGCATCCTTATACAGCATAAATGGGGTTCCAGTCTCAGTTTGAGC 3284949 Query 221869 CACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGG 221927 | | | ||| | ||| || | |||| || | | || | || ||||| Sbjct 3284948 CTCTATAATGGAATACCATAGCT-TCTGAGCTTTAATGGTGCGACGACCTCTGCCCTC-- 3284892 Query 221928 TCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTG 221987 ||||||||| ||||| || | || |||| |||||||| | || || |||| Sbjct 3284891 -CTTTTCATATGTCGTATAAAGTTTTTCGAACTCCTCACCGTAAACATCAGAGAGACCTG 3284833 Query 221988 GACACCTGGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGA 222047 | ||| ||||||||| ||| |||||| | || ||||| |||| |||||| || | Sbjct 3284832 GGCACTCATTGGGACACATTAGAGTCCAGTCCCCATTATCTTTCACCCGCTGCATAAATA 3284773 Query 222048 GGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGT 222107 ||| || ||||| || || || | ||| | || || ||| ||| || | | Sbjct 3284772 AGTCGGGAATCCAAAGTGCAACGAAAATATCACGGGCACGAATCTCTTCCTTACCATGAT 3284713 Query 222108 TTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCA 222167 | || | || ||| | |||||||| ||| | ||||||||||| | ||| | || | Sbjct 3284712 TCTTGCGCACATCAATGGTATCAAAAATATCATCATGCCACGGCTCAATATACATCGCAA 3284653 Query 222168 GAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201 || || ||||||||||| ||||| || || || Sbjct 3284652 AGGCACCAGGTCGCTTGTTACCACCTTGGTCAAC 3284619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844579399360