Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq1 120 2e-21
seq2 93.3 3e-13
>seq1
Length=4294417
Score = 120 bits (132), Expect = 2e-21
Identities = 372/564 (66%), Gaps = 20/564 (4%)
Strand=Plus/Minus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGT-TTGGCAAAATGGTAA 474387
|||||||| |||||||| || || || ||| |||||| || || ||||| | ||
Sbjct 702872 GCAATTGGAATTGATTTGGGTACAACATACTCTTGTGTTGCCCACTTCGCAAAC-GATAG 702814
Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447
|| || || |||||||| ||||||||||| | || || || || | ||| | || ||
Sbjct 702813 GGTTGAGATTATTGCCAACGACCAAGGTAACCGTACGACTCCTTCGTTCGTTGCCTTCAC 702754
Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507
||| || || | | ||||| |||||||| || | ||||| || || || ||
Sbjct 702753 TGACACCGAGCGGTTGATTGGTGATGCTGCCAAGAACCAAGCAGCCATGAACCCCAAGAA 702694
Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTC--CAA 474565
|| | || ||||| || | |||||||| ||||| || | || | ||| |||
Sbjct 702693 CACCGTCTTCGATGCCAAGCGGTTGATTGGCCGTAAGTTCAACGACCCTGAGGTCGTCAA 702634
Query 474566 -TCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGA 474624
| || | |||| || || ||||| || | | || || || || |
Sbjct 702633 CGACGCTAAG---CATTTCCCATTCAAGGTCATCGACAAGGCCGGAAAGCCTGTCATCCA 702577
Query 474625 AGC--AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTT 474682
|| |||||| | ||||| || || | || | || || | || || |||||
Sbjct 702576 GGCCGAATACAAG--GGTGAGACCAAGGACTTCACTCCTGAGGAGATCAGCTCCATGGTC 702519
Query 474683 TTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGA---TGC 474738
| |||| ||||| | ||||| ||| | || || || | || ||| |||
Sbjct 702518 CTCACCAAGATGAAGGAGACCGCTGAGGGC-TACCTCGGTGGTAAGGT---TGAGAGTGC 702463
Query 474739 AGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGG 474798
||||| || ||||| ||||| || ||||| ||||| ||||| || |||||||| || ||
Sbjct 702462 TGTAATCACCGTTCCTGCATACTTCAATGACTCTCAGCGTCAGGCCACTAAAGACGCTGG 702403
Query 474799 AAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGC 474858
| || || || || || ||| | ||||| ||||| || || || || ||||| ||||
Sbjct 702402 TACGATCGCTGGCCTGAACGTTCTCCGTATCATTAACGAGCCTACCGCCGCCGCTATTGC 702343
Query 474859 TTATGGTCTTGATAAGAATTCTGA 474882
|| |||||||| ||||| || ||
Sbjct 702342 CTACGGTCTTGACAAGAAGTCCGA 702319
Score = 111 bits (122), Expect = 1e-18
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| ||||| || || || || || || || || || || || |||| |||||
Sbjct 1826389 ACGCAGACGCAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGT 1826330
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | ||| || || ||||| || || ||||| | ||| |||||||| || || |||||
Sbjct 1826329 GCGGCCATCCTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGGATTCC 1826270
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
|||||||| || ||||| |||||| |||||||| || | | | |||||
Sbjct 1826269 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCCGAGGACTCAACCTCAAG 1826210
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|||||| || ||||| ||||| |||||||||||||| ||
Sbjct 1826209 GGTAATGGTCTTACCCGTGAGGGTCTTAACGAAAATCTG 1826171
Score = 93.3 bits (102), Expect = 3e-13
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| | ||| | ||||| ||||| || ||| || | ||| || |||| |||||
Sbjct 3810732 ACGTAAACGCAAGACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGAGAGAGT 3810673
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
|| || ||||| ||||| |||||||| || | || ||||||||||||||||| ||
Sbjct 3810672 CCTACCGTCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGGAATACC 3810613
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
|||||| || |||||||| || ||| ||||| || || | | | | ||| |
Sbjct 3810612 TTCCTTATCCTGAATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCA-CTTCGA 3810554
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| || || || || || ||||| || |||||||| || ||
Sbjct 3810553 GAGTGATCGTCTTTCCCGTGAGGGTTTTAACGAATATCTG 3810514
Score = 87.8 bits (96), Expect = 1e-11
Identities = 127/177 (72%), Gaps = 2/177 (1%)
Strand=Plus/Minus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|| ||||||| | ||| | | ||| ||||||||||| ||||| ||||| | || ||
Sbjct 3810461 TTGTAATCAGACAAAGTACGGCCATCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGC 3810402
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|| ||||| ||||| || |||||||| ||||||||| || ||| || ||||||||
Sbjct 3810401 TGGTCAGGTGGAATACCCTCCTTGTCCTGAATCTTTGACTTCACATTATCGATAGTATCC 3810342
Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | | | ||| ||| || || || ||||| | |||||| || || || ||
Sbjct 3810341 GACGACTCCACCTCCAA-GGTGATCGTCTTGCCGGTTAAAGTCTTCACAAAGATCTG 3810286
>seq2
Length=2231275
Score = 93.3 bits (102), Expect = 3e-13
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||||||||| || || || ||||| || || || | || || |||| || ||
Sbjct 1211818 ACGAAGACGAAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGT 1211877
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| ||| || || |||||||| || || || | ||| ||||| ||||| || || ||
Sbjct 1211878 GCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGGATACC 1211937
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
|||||||| |||||||| || ||| || || ||||| | | | |||||
Sbjct 1211938 CTCCTTGTCCTGAATCTTGCTCTTAACATTGTCGATGGTATCCGAGGACTCAACCTCAAG 1211997
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|||||| || ||||| ||||| ||||| |||||||| ||
Sbjct 1211998 GGTAATGGTCTTACCCGTGAGTGTCTTGACGAAAATCTG 1212036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268178384997812
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |