Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq2 131 2e-25 >seq2 Length=2231275 Score = 131 bits (144), Expect = 2e-25 Identities = 283/416 (68%), Gaps = 8/416 (2%) Strand=Plus/Minus Query 138163 ATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTG 138222 |||||| |||||||| | |||| | ||||| || |||||||| ||||| || || | Sbjct 661093 ATGGTGACAGATGTTTGCCGACACATACCGGACCAACTCCAGGACCACCACCACCGTGAG 661034 Query 138223 GAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTT 138282 |||||||||||||||| |||| ||||||||| ||||| || || || | || | || Sbjct 661033 GAATACAGAATGTCTTGTGTAGATTTAGATGGCATACGTCAGCGCCTAAATCTCCAGGGG 660974 Query 138283 TTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGT 138342 | |||||| || || ||||| | ||| || ||||| | |||||||| || ||| | Sbjct 660973 AAGTTAGACCAACTTGCGCATTCATATTAGCGCCATCCATGTATACCTGTCCGCCAAATT 660914 Query 138343 CATGAACGATCTTACATATCTGT-CTGATGTTTGTTTCAAATACACCATGAGTCGATGGA 138401 | || || || || || || | | ||| || ||| | || || ||| || ||| Sbjct 660913 CGTGGACAAT-TTCGATGGCTTTACGGATACCTGGCTCATAAACTCCGAAAGTTGAAGGA 660855 Query 138402 TATGTAATCATAATACATGAGAGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCT 138461 || |||| ||||| ||| | | || | | | |||||| || ||||| Sbjct 660854 TAGGTAACCATAAACGCTGACAAGTTTGCTGCGTGCTTCTGAGCTTTCGCCTTAAGATCC 660795 Query 138462 TTGATGTCTATGTTGCCATCATCATCA-CACTTGACACCTACAACTTTCATTCCTGCCAT 138520 | | || | ||| | || | || ||||| | |||| ||||| || || | Sbjct 660794 TCCAGATC-AAGTTCACCCGATGGCAAGCATTTGACCACGACAATCTTCATCCCAGCAAC 660736 Query 138521 GACTGCACTAGCAGGATTAGTTCCATGTGCTGACT--CTGGTATCAGACATACATT 138574 | |||||||||| ||||||||||||||||| ||| || ||||| |||||||| Sbjct 660735 GGCTGCACTAGCTGGATTAGTTCCATGTGC--ACTAATAGGAATCAGGCATACATT 660682 Score = 105 bits (116), Expect = 8e-18 Identities = 185/267 (69%), Gaps = 2/267 (1%) Strand=Plus/Minus Query 139248 GCTATAGCATGTAGTCCATCTGCACCATGATATGCTGCATA-GAATCCAGACATATTTGC 139306 |||||| || |||||| | | ||||||||| ||| || | | || || ||||| || Sbjct 660008 GCTATATCAGTTAGTCCTTGAGGACCATGATAGCATGCGTACGTAGCC-GAAATATTCGC 659950 Query 139307 GAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTC 139366 |||| ||||| || || || || || ||| || || ||||| || |||||||| || Sbjct 659949 CAGCAAGGCTTGAGCAGTACAAATATTCGAGGTAGCCTTATCTCTCCTGATATGCTGTTC 659890 Query 139367 TCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTAC 139426 | ||||| | || || || || || |||| || || ||| | |||||| Sbjct 659889 GCGTGTTTGCAAGGCCAACCTATACGCTTGATTTCCAAGTCTATCCTTGGTGATACCTAC 659830 Query 139427 AATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGG 139486 |||||| ||||| || |||||| | | || | | |||||| || || ||||| || Sbjct 659829 AATTCTTCCAGGAATTCGTCTCTTGAATTGATCCCTGGCTGCAAAAAAAGCTGCATGTGG 659770 Query 139487 ACCTCCGTATCCCATAGGAATACCAAA 139513 |||||||||||||| || | ||||| Sbjct 659769 TCCTCCGTATCCCATGGGCACGCCAAA 659743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998262487880