Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq2 131 2e-25
>seq2
Length=2231275
Score = 131 bits (144), Expect = 2e-25
Identities = 283/416 (68%), Gaps = 8/416 (2%)
Strand=Plus/Minus
Query 138163 ATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTG 138222
|||||| |||||||| | |||| | ||||| || |||||||| ||||| || || |
Sbjct 661093 ATGGTGACAGATGTTTGCCGACACATACCGGACCAACTCCAGGACCACCACCACCGTGAG 661034
Query 138223 GAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTT 138282
|||||||||||||||| |||| ||||||||| ||||| || || || | || | ||
Sbjct 661033 GAATACAGAATGTCTTGTGTAGATTTAGATGGCATACGTCAGCGCCTAAATCTCCAGGGG 660974
Query 138283 TTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGT 138342
| |||||| || || ||||| | ||| || ||||| | |||||||| || ||| |
Sbjct 660973 AAGTTAGACCAACTTGCGCATTCATATTAGCGCCATCCATGTATACCTGTCCGCCAAATT 660914
Query 138343 CATGAACGATCTTACATATCTGT-CTGATGTTTGTTTCAAATACACCATGAGTCGATGGA 138401
| || || || || || || | | ||| || ||| | || || ||| || |||
Sbjct 660913 CGTGGACAAT-TTCGATGGCTTTACGGATACCTGGCTCATAAACTCCGAAAGTTGAAGGA 660855
Query 138402 TATGTAATCATAATACATGAGAGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCT 138461
|| |||| ||||| ||| | | || | | | |||||| || |||||
Sbjct 660854 TAGGTAACCATAAACGCTGACAAGTTTGCTGCGTGCTTCTGAGCTTTCGCCTTAAGATCC 660795
Query 138462 TTGATGTCTATGTTGCCATCATCATCA-CACTTGACACCTACAACTTTCATTCCTGCCAT 138520
| | || | ||| | || | || ||||| | |||| ||||| || || |
Sbjct 660794 TCCAGATC-AAGTTCACCCGATGGCAAGCATTTGACCACGACAATCTTCATCCCAGCAAC 660736
Query 138521 GACTGCACTAGCAGGATTAGTTCCATGTGCTGACT--CTGGTATCAGACATACATT 138574
| |||||||||| ||||||||||||||||| ||| || ||||| ||||||||
Sbjct 660735 GGCTGCACTAGCTGGATTAGTTCCATGTGC--ACTAATAGGAATCAGGCATACATT 660682
Score = 105 bits (116), Expect = 8e-18
Identities = 185/267 (69%), Gaps = 2/267 (1%)
Strand=Plus/Minus
Query 139248 GCTATAGCATGTAGTCCATCTGCACCATGATATGCTGCATA-GAATCCAGACATATTTGC 139306
|||||| || |||||| | | ||||||||| ||| || | | || || ||||| ||
Sbjct 660008 GCTATATCAGTTAGTCCTTGAGGACCATGATAGCATGCGTACGTAGCC-GAAATATTCGC 659950
Query 139307 GAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTC 139366
|||| ||||| || || || || || ||| || || ||||| || |||||||| ||
Sbjct 659949 CAGCAAGGCTTGAGCAGTACAAATATTCGAGGTAGCCTTATCTCTCCTGATATGCTGTTC 659890
Query 139367 TCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTAC 139426
| ||||| | || || || || || |||| || || ||| | ||||||
Sbjct 659889 GCGTGTTTGCAAGGCCAACCTATACGCTTGATTTCCAAGTCTATCCTTGGTGATACCTAC 659830
Query 139427 AATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGG 139486
|||||| ||||| || |||||| | | || | | |||||| || || ||||| ||
Sbjct 659829 AATTCTTCCAGGAATTCGTCTCTTGAATTGATCCCTGGCTGCAAAAAAAGCTGCATGTGG 659770
Query 139487 ACCTCCGTATCCCATAGGAATACCAAA 139513
|||||||||||||| || | |||||
Sbjct 659769 TCCTCCGTATCCCATGGGCACGCCAAA 659743
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578998262487880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |