Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1 116 7e-21 >seq1 Length=4294417 Score = 116 bits (128), Expect = 7e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | || || || || | ||| | ||| | ||| || ||| || ||||| Sbjct 3810512 ATACCACCACGGAGGCGCAAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCA 3810453 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || |||| || | || || | ||| |||||||| ||||| |||| ||| ||||||||| Sbjct 3810452 GACAAAGTACGGCCATCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGT 3810393 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || || || || || || || |||||| |||||||| ||||| || Sbjct 3810392 GGAATACCCTCCTTGTCCTGAATCTTTGACTTCACATTATCGATAGTATCCGACGACTCC 3810333 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTT 172071 || || | || || || || || ||||| || || | || |||||||||| Sbjct 3810332 ACCTCCAAGGTGATCGTCTTGCCGGTTAAAGTCTTCACAAAGATCTGCATTT 3810281 Score = 98.7 bits (108), Expect = 2e-15 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 171913 CGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTT 171972 |||| || | || ||||||||||| || |||| |||||| ||||| || || ||||| | Sbjct 3810667 CGTCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGGAATACCTTCCT 3810608 Query 171973 TATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAA 172032 |||| || || || || ||||| || || || || || || ||||| ||||| | Sbjct 3810607 TATCCTGAATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCACTTCGAGAGTGA 3810548 Query 172033 TGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | || || || || | ||||||| |||||||||||| Sbjct 3810547 TCGTCTTTCCCGTGAGGGTTTTAACGAATATCTGCAT 3810511 Score = 84.2 bits (92), Expect = 4e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 || ||||| || ||||| || | |||||| || || || ||||| || || || || || Sbjct 1826313 TGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGGATTCCCTCCTTGTCCTGGATC 1826254 Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043 || || ||||| ||||| || || || || || || || |||||||| ||||| Sbjct 1826253 TTGGACTTGACATTGTCAATAGTGTCCGAGGACTCAACCTCAAGGGTAATGGTCTTACCC 1826194 Query 172044 GTTAATGTTTTAATGAATATCTGCATTTT 172072 || | || |||| ||| ||||||||||| Sbjct 1826193 GTGAGGGTCTTAACGAAAATCTGCATTTT 1826165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135785030200