Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq1 212 2e-49
seq2 89.7 2e-12
>seq1
Length=4294417
Score = 212 bits (234), Expect = 2e-49
Identities = 525/784 (67%), Gaps = 16/784 (2%)
Strand=Plus/Minus
Query 155581 CAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCT-TGTCGTCGCTGTATTCTACA 155639
|||| ||| ||| || ||||| || || |||||||||| || | || ||| || ||
Sbjct 3285116 CAAGGCCAG-AGAGGCAAGATTGCACACTGCAGTCTCCTCTGGGGACGA-GTACTCAACG 3285059
Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699
||||| ||||| ||||| || |||||| || || | || | ||| |||||||| | |
Sbjct 3285058 ATCTCGCAGCAAAGGTTTGATGACTTGATCGTACCAAGGTTTTGCTGATTAGATTTGCGG 3284999
Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759
|| || |||||||| || || || |||||||||| ||||| | || || || | |||
Sbjct 3284998 TTGCAGGCATCCTTATACAGCATAAATGGGGTTCCAGTCTCAGTTTGAGCCTCTATAATG 3284939
Query 155760 TTTAGCCAGAGGTCACGGGCATTAATT-TGCTTGTTGTA-TCTGCCTTCCGACTCATATT 155817
||| || | | || ||||| ||| | | |||||| ||| ||||||
Sbjct 3284938 GAATACCATAGCTTCTGAGCTTTAATGGTGC--GACGACCTCTGCCCTCCTTTTCATATG 3284881
Query 155818 TCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGG 155877
|| |||| || || | | |||||||||||| |||| || || ||||||| || ||
Sbjct 3284880 TCGTATAAAGTTTTTCGAACTCCTCACCGTAAACATCAGAGAGACCTGGGCACTCATTGG 3284821
Query 155878 GGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCC 155937
| || | || | ||| |||| | | || |||| |||||||| || ||
Sbjct 3284820 GACACATTAGAGTCCAGTCCCCATTATCTTTCACCCGCTGCATAAATAAGTCGGGAATCC 3284761
Query 155938 AAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCT 155997
||| ||| ||||| || | || ||| || | || |||||||| || | |
Sbjct 3284760 AAAGTGCAACGAAAATATCACGGGCACGAATCTCTTCCTTACCATGATTCTTGCGCACAT 3284701
Query 155998 CTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCC 156057
| | | || ||||||| ||| ||||| | |||||| ||||| |||| |
Sbjct 3284700 CAATGGTATCAAAAATATCATCATGCCACGGCTCAATATACATCGCAAAGGCACCAGGTC 3284641
Query 156058 TCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAA 156114
|||| ||||| || || ||||| |||||||| |||||| |||||| | ||| ||||
Sbjct 3284640 GCTTGTTACCACCTTGGTCAACATAGCGAGCAGTATTATTGTAGACACGCAACATGGGAA 3284581
Query 156115 TAATACCATTGGAAGTGCCATTGGTTCC-GCGAATATGCGAACCAGATGAGCGAACATTA 156173
||| ||||||||||| ||||| || || ||| || | || || | | |||| ||
Sbjct 3284580 TAAGCCCATTGGAAGTACCATTTGTACCAGCG-ATGTAAGAGCCCGTGGCACGAATGTTG 3284522
Query 156174 TGAATATGTAGTCCAATACCACCTGACCAT--TTAGAAATTTGAGCGCATTCCTTTACAG 156231
|||||| || ||||| || || | ||| || ||||| || |||||||| | |
Sbjct 3284521 TGAATACTGAGGCCAATTCCTCCGG--CATTCTTTGAAATCAAGGCACATTCCTTGAGCG 3284464
Query 156232 TATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATT 156291
||| | ||||| |||||| |||||| | ||| | || | |||| ||| | ||
Sbjct 3284463 TATCATAGATACCATCAATACTATCATCCTTCATCGTTACCAAGAAGCAGGAAGACATTT 3284404
Query 156292 GAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAG 156351
| || ||| ||||| || ||| | || || || | |||||||| || || || | |
Sbjct 3284403 GTGGCTTTGGAGTTCCTGCATTGTAGAGGGTTGGACTGGCATGAATGAAGTATTTTTGTG 3284344
Query 156352 ACAT 156355
||||
Sbjct 3284343 ACAT 3284340
Score = 138 bits (152), Expect = 3e-27
Identities = 230/328 (70%), Gaps = 6/328 (2%)
Strand=Plus/Plus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466
|| |||||||| || || ||||| || || |||||||||| || || ||||
Sbjct 2362468 ATGAGACCACAGATACCGCAAACATGTACCCTAAAAGCATCAGACGCCTCCATCAGCCTT 2362527
Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526
|||| | ||| || ||||| |||| ||||||||||||||| |||||||| ||||||
Sbjct 2362528 TCCTTCATAAAGGCAGCCGCACCATGTGCAATCATACAATCACGTTCCATTTCTCCGAAA 2362587
Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGA 251586
|| |||||||||||||| | |||||| || | || || | ||| || | | ||||
Sbjct 2362588 CGCAGACCACCATCGCGCGACCTACCTTCAACGGGTTGCCTAGTTAGGATCTGAACAGGA 2362647
Query 251587 CCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCG 251646
|| || || ||| |||||| | ||||||||| | || | ||| || |||
Sbjct 2362648 CCACGGGCACGAGCATGAATCTTATCGTCAACCATATGCCTCAGTCTCTGATAATATGTC 2362707
Query 251647 GGACCGATGAAGATGCTCGAAGGCATTTGC-TCT--CCAGTTAGAGCGTTATACATAACT 251703
||||||| ||||| || | || ||| || ||| || || | | ||||||||||||
Sbjct 2362708 GGACCGAAGAAGA--CTTG-AGCCATAAGCTTCTTACCTGTATGTCCATTATACATAACT 2362764
Query 251704 TCGTTTCCATTAGATTCATAACCAAGTT 251731
||| ||| |||| ||| ||| |||
Sbjct 2362765 TCGAAGCCACGGGATTGATACCCATGTT 2362792
Score = 120 bits (132), Expect = 9e-22
Identities = 129/168 (77%), Gaps = 2/168 (1%)
Strand=Plus/Plus
Query 233273 GCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTT 233332
||||| || |||||||||||||||||||||||||| || | |||||||||||||||
Sbjct 2362546 GCACCATGTGCAATCATACAATCACGTTCCATTTCTCCGAAACGCAGACCACCATCGCGC 2362605
Query 233333 GACCTACCCTGGACTGTTTGACGAGTTA-AAACAGTTCTTGGACCCTGAGCACGATAATT 233391
|||||||| | || | ||| | ||||| | | | | ||||| | |||||| ||
Sbjct 2362606 GACCTACCTTCAACGGGTTGCCTAGTTAGGATCTGAAC-AGGACCACGGGCACGAGCATG 2362664
Query 233392 AATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAACACGGACC 233439
||| ||||| | |||||||||| |||||||| |||||| ||||||
Sbjct 2362665 AATCTTATCGTCAACCATATGCCTCAGTCTCTGATAATATGTCGGACC 2362712
Score = 93.3 bits (102), Expect = 1e-13
Identities = 214/320 (67%), Gaps = 2/320 (1%)
Strand=Plus/Plus
Query 289036 GCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAAT 289095
|| || || || |||||||| | | | || | ||||| | || | | ||| ||
Sbjct 2389631 GCGTCTATCTCATCAATGAAGACAATGGAAGGGGCATTTTTCCGGGCCAAAGAAAACAAG 2389690
Query 289096 TCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACT 289155
|| | || || ||||| || | ||| ||| ||||||| || || ||||| || |||
Sbjct 2389691 TCCCGCACCCGTGATGCACCTACACCGACAAACATTTCAACGAACTCAGAGCCGCTCACT 2389750
Query 289156 TGAAT-GAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGT 289214
|| | ||| | ||| || |||||||| ||| | |||||||| |||||||| ||
Sbjct 2389751 -GAGTAGAAGGGCACACCAGCCTCGCCTGCGGTAGCCTTAGCCAGAAGCGTCTTACCAGT 2389809
Query 289215 TCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTT 289274
|||||||||||| | || | | ||| || | ||| ||||| | || |||||
Sbjct 2389810 ACCAGGTGGTCCCGAAAGTACAGCACCCCGGGGAATTTTGGCCCCCAAATGCTCGTATTT 2389869
Query 289275 CTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCC 289334
|| || ||| | || || |||| |||| | |||| |||||||| | ||| ||
Sbjct 2389870 CTGGGGATGCTTGAGGAAATCGACAAATTCCATGATCTCATTCTTTGCCTCCTGACAGCC 2389929
Query 289335 TGCTACATCAGCAAAAGTAA 289354
|| ||||| | |||| |||
Sbjct 2389930 CGCGACATCGGAAAAATTAA 2389949
>seq2
Length=2231275
Score = 89.7 bits (98), Expect = 2e-12
Identities = 224/327 (69%), Gaps = 20/327 (6%)
Strand=Plus/Plus
Query 289027 TTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATT----TTGTCTCGC 289082
||||||| |||||||| || || || | |||| ||| | || ||| | |||
Sbjct 1481210 TTACCAATGGCATCAATCTCATCGATCCAGATCATCGCCGGGGTTTTCTCTTTGGCCCGC 1481269
Query 289083 AATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTC 289142
||| ||| | |||||||| ||||| || |||| ||| | ||||||| ||||||||
Sbjct 1481270 --TTGAAAAGA--TCTCTTACTCGGGAGGCACCAACACCGCTAAACATTTCGACAAATTC 1481325
Query 289143 AGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202
|| | ||||| | ||| | || | || || ||||| |||| | ||||| ||
Sbjct 1481326 CGACCCTGATACCGAGAAGAACGGGACGTCGGCCTCTCCTGCCGTTGCCTTTGCCAGTAG 1481385
Query 289203 TGTCTTACCTGTTCCAGGTGGTCC-CTC-TAATAGAACTCCCTTTGGTACTTTTGCCCCA 289260
||||||||| || |||||||| || ||| ||||| | || ||| | ||| || ||
Sbjct 1481386 TGTCTTACCAGTACCAGGTGGACCGCTCAGAATAG--CACCGCGTGGAATTTTAGCTCC- 1481442
Query 289261 GCAGACT--TATATTTCTCAGGGCTCTTTAA-AAATTCTACAATTTCCTCAAGTTCATAT 289317
| || | ||||| ||| |||| ||||| ||||| |||| |||| | |||
Sbjct 1481443 -TAATCTTGTGTATTTTTCA-GGCTTTTTAAGGAATTCCACAAATTCCATGACTTCCACC 1481500
Query 289318 TTTGCCTCATCACAT-CCTGCTACATC 289343
|||||||| || ||| ||||| || ||
Sbjct 1481501 TTTGCCTCGTC-CATACCTGCCACGTC 1481526
Score = 87.8 bits (96), Expect = 5e-12
Identities = 106/141 (75%), Gaps = 5/141 (4%)
Strand=Plus/Minus
Query 301813 AGAATTTC-TTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGC 301871
||||| || ||||| ||| || ||||| ||||| || || |||| ||||||||
Sbjct 1628588 AGAATCTCCTTCAA-ACGTGGTACACCCAATGTTACATTT---TTAGACGACACACCAGC 1628533
Query 301872 AAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931
| ||||||||||||| || || | ||| || | |||||||||||| ||| || ||||
Sbjct 1628532 ATAGTGGAAAGTATTGAGTGTCATTTGCGTTGCTGGCTCACCAATCGATTGAGCAGCAAC 1628473
Query 301932 CATACCAACCATTTCTCCTGG 301952
| ||| |||||||| |||||
Sbjct 1628472 AACACCTACCATTTCACCTGG 1628452
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817241704403
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |