Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1 212 2e-49 seq2 89.7 2e-12 >seq1 Length=4294417 Score = 212 bits (234), Expect = 2e-49 Identities = 525/784 (67%), Gaps = 16/784 (2%) Strand=Plus/Minus Query 155581 CAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCT-TGTCGTCGCTGTATTCTACA 155639 |||| ||| ||| || ||||| || || |||||||||| || | || ||| || || Sbjct 3285116 CAAGGCCAG-AGAGGCAAGATTGCACACTGCAGTCTCCTCTGGGGACGA-GTACTCAACG 3285059 Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 ||||| ||||| ||||| || |||||| || || | || | ||| |||||||| | | Sbjct 3285058 ATCTCGCAGCAAAGGTTTGATGACTTGATCGTACCAAGGTTTTGCTGATTAGATTTGCGG 3284999 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 || || |||||||| || || || |||||||||| ||||| | || || || | ||| Sbjct 3284998 TTGCAGGCATCCTTATACAGCATAAATGGGGTTCCAGTCTCAGTTTGAGCCTCTATAATG 3284939 Query 155760 TTTAGCCAGAGGTCACGGGCATTAATT-TGCTTGTTGTA-TCTGCCTTCCGACTCATATT 155817 ||| || | | || ||||| ||| | | |||||| ||| |||||| Sbjct 3284938 GAATACCATAGCTTCTGAGCTTTAATGGTGC--GACGACCTCTGCCCTCCTTTTCATATG 3284881 Query 155818 TCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGG 155877 || |||| || || | | |||||||||||| |||| || || ||||||| || || Sbjct 3284880 TCGTATAAAGTTTTTCGAACTCCTCACCGTAAACATCAGAGAGACCTGGGCACTCATTGG 3284821 Query 155878 GGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCC 155937 | || | || | ||| |||| | | || |||| |||||||| || || Sbjct 3284820 GACACATTAGAGTCCAGTCCCCATTATCTTTCACCCGCTGCATAAATAAGTCGGGAATCC 3284761 Query 155938 AAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCT 155997 ||| ||| ||||| || | || ||| || | || |||||||| || | | Sbjct 3284760 AAAGTGCAACGAAAATATCACGGGCACGAATCTCTTCCTTACCATGATTCTTGCGCACAT 3284701 Query 155998 CTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCC 156057 | | | || ||||||| ||| ||||| | |||||| ||||| |||| | Sbjct 3284700 CAATGGTATCAAAAATATCATCATGCCACGGCTCAATATACATCGCAAAGGCACCAGGTC 3284641 Query 156058 TCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAA 156114 |||| ||||| || || ||||| |||||||| |||||| |||||| | ||| |||| Sbjct 3284640 GCTTGTTACCACCTTGGTCAACATAGCGAGCAGTATTATTGTAGACACGCAACATGGGAA 3284581 Query 156115 TAATACCATTGGAAGTGCCATTGGTTCC-GCGAATATGCGAACCAGATGAGCGAACATTA 156173 ||| ||||||||||| ||||| || || ||| || | || || | | |||| || Sbjct 3284580 TAAGCCCATTGGAAGTACCATTTGTACCAGCG-ATGTAAGAGCCCGTGGCACGAATGTTG 3284522 Query 156174 TGAATATGTAGTCCAATACCACCTGACCAT--TTAGAAATTTGAGCGCATTCCTTTACAG 156231 |||||| || ||||| || || | ||| || ||||| || |||||||| | | Sbjct 3284521 TGAATACTGAGGCCAATTCCTCCGG--CATTCTTTGAAATCAAGGCACATTCCTTGAGCG 3284464 Query 156232 TATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATT 156291 ||| | ||||| |||||| |||||| | ||| | || | |||| ||| | || Sbjct 3284463 TATCATAGATACCATCAATACTATCATCCTTCATCGTTACCAAGAAGCAGGAAGACATTT 3284404 Query 156292 GAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAG 156351 | || ||| ||||| || ||| | || || || | |||||||| || || || | | Sbjct 3284403 GTGGCTTTGGAGTTCCTGCATTGTAGAGGGTTGGACTGGCATGAATGAAGTATTTTTGTG 3284344 Query 156352 ACAT 156355 |||| Sbjct 3284343 ACAT 3284340 Score = 138 bits (152), Expect = 3e-27 Identities = 230/328 (70%), Gaps = 6/328 (2%) Strand=Plus/Plus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || |||||||| || || ||||| || || |||||||||| || || |||| Sbjct 2362468 ATGAGACCACAGATACCGCAAACATGTACCCTAAAAGCATCAGACGCCTCCATCAGCCTT 2362527 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| | ||| || ||||| |||| ||||||||||||||| |||||||| |||||| Sbjct 2362528 TCCTTCATAAAGGCAGCCGCACCATGTGCAATCATACAATCACGTTCCATTTCTCCGAAA 2362587 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGA 251586 || |||||||||||||| | |||||| || | || || | ||| || | | |||| Sbjct 2362588 CGCAGACCACCATCGCGCGACCTACCTTCAACGGGTTGCCTAGTTAGGATCTGAACAGGA 2362647 Query 251587 CCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCG 251646 || || || ||| |||||| | ||||||||| | || | ||| || ||| Sbjct 2362648 CCACGGGCACGAGCATGAATCTTATCGTCAACCATATGCCTCAGTCTCTGATAATATGTC 2362707 Query 251647 GGACCGATGAAGATGCTCGAAGGCATTTGC-TCT--CCAGTTAGAGCGTTATACATAACT 251703 ||||||| ||||| || | || ||| || ||| || || | | |||||||||||| Sbjct 2362708 GGACCGAAGAAGA--CTTG-AGCCATAAGCTTCTTACCTGTATGTCCATTATACATAACT 2362764 Query 251704 TCGTTTCCATTAGATTCATAACCAAGTT 251731 ||| ||| |||| ||| ||| ||| Sbjct 2362765 TCGAAGCCACGGGATTGATACCCATGTT 2362792 Score = 120 bits (132), Expect = 9e-22 Identities = 129/168 (77%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 233273 GCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTT 233332 ||||| || |||||||||||||||||||||||||| || | ||||||||||||||| Sbjct 2362546 GCACCATGTGCAATCATACAATCACGTTCCATTTCTCCGAAACGCAGACCACCATCGCGC 2362605 Query 233333 GACCTACCCTGGACTGTTTGACGAGTTA-AAACAGTTCTTGGACCCTGAGCACGATAATT 233391 |||||||| | || | ||| | ||||| | | | | ||||| | |||||| || Sbjct 2362606 GACCTACCTTCAACGGGTTGCCTAGTTAGGATCTGAAC-AGGACCACGGGCACGAGCATG 2362664 Query 233392 AATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAACACGGACC 233439 ||| ||||| | |||||||||| |||||||| |||||| |||||| Sbjct 2362665 AATCTTATCGTCAACCATATGCCTCAGTCTCTGATAATATGTCGGACC 2362712 Score = 93.3 bits (102), Expect = 1e-13 Identities = 214/320 (67%), Gaps = 2/320 (1%) Strand=Plus/Plus Query 289036 GCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAAT 289095 || || || || |||||||| | | | || | ||||| | || | | ||| || Sbjct 2389631 GCGTCTATCTCATCAATGAAGACAATGGAAGGGGCATTTTTCCGGGCCAAAGAAAACAAG 2389690 Query 289096 TCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACT 289155 || | || || ||||| || | ||| ||| ||||||| || || ||||| || ||| Sbjct 2389691 TCCCGCACCCGTGATGCACCTACACCGACAAACATTTCAACGAACTCAGAGCCGCTCACT 2389750 Query 289156 TGAAT-GAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGT 289214 || | ||| | ||| || |||||||| ||| | |||||||| |||||||| || Sbjct 2389751 -GAGTAGAAGGGCACACCAGCCTCGCCTGCGGTAGCCTTAGCCAGAAGCGTCTTACCAGT 2389809 Query 289215 TCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTT 289274 |||||||||||| | || | | ||| || | ||| ||||| | || ||||| Sbjct 2389810 ACCAGGTGGTCCCGAAAGTACAGCACCCCGGGGAATTTTGGCCCCCAAATGCTCGTATTT 2389869 Query 289275 CTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCC 289334 || || ||| | || || |||| |||| | |||| |||||||| | ||| || Sbjct 2389870 CTGGGGATGCTTGAGGAAATCGACAAATTCCATGATCTCATTCTTTGCCTCCTGACAGCC 2389929 Query 289335 TGCTACATCAGCAAAAGTAA 289354 || ||||| | |||| ||| Sbjct 2389930 CGCGACATCGGAAAAATTAA 2389949 >seq2 Length=2231275 Score = 89.7 bits (98), Expect = 2e-12 Identities = 224/327 (69%), Gaps = 20/327 (6%) Strand=Plus/Plus Query 289027 TTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATT----TTGTCTCGC 289082 ||||||| |||||||| || || || | |||| ||| | || ||| | ||| Sbjct 1481210 TTACCAATGGCATCAATCTCATCGATCCAGATCATCGCCGGGGTTTTCTCTTTGGCCCGC 1481269 Query 289083 AATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTC 289142 ||| ||| | |||||||| ||||| || |||| ||| | ||||||| |||||||| Sbjct 1481270 --TTGAAAAGA--TCTCTTACTCGGGAGGCACCAACACCGCTAAACATTTCGACAAATTC 1481325 Query 289143 AGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202 || | ||||| | ||| | || | || || ||||| |||| | ||||| || Sbjct 1481326 CGACCCTGATACCGAGAAGAACGGGACGTCGGCCTCTCCTGCCGTTGCCTTTGCCAGTAG 1481385 Query 289203 TGTCTTACCTGTTCCAGGTGGTCC-CTC-TAATAGAACTCCCTTTGGTACTTTTGCCCCA 289260 ||||||||| || |||||||| || ||| ||||| | || ||| | ||| || || Sbjct 1481386 TGTCTTACCAGTACCAGGTGGACCGCTCAGAATAG--CACCGCGTGGAATTTTAGCTCC- 1481442 Query 289261 GCAGACT--TATATTTCTCAGGGCTCTTTAA-AAATTCTACAATTTCCTCAAGTTCATAT 289317 | || | ||||| ||| |||| ||||| ||||| |||| |||| | ||| Sbjct 1481443 -TAATCTTGTGTATTTTTCA-GGCTTTTTAAGGAATTCCACAAATTCCATGACTTCCACC 1481500 Query 289318 TTTGCCTCATCACAT-CCTGCTACATC 289343 |||||||| || ||| ||||| || || Sbjct 1481501 TTTGCCTCGTC-CATACCTGCCACGTC 1481526 Score = 87.8 bits (96), Expect = 5e-12 Identities = 106/141 (75%), Gaps = 5/141 (4%) Strand=Plus/Minus Query 301813 AGAATTTC-TTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGC 301871 ||||| || ||||| ||| || ||||| ||||| || || |||| |||||||| Sbjct 1628588 AGAATCTCCTTCAA-ACGTGGTACACCCAATGTTACATTT---TTAGACGACACACCAGC 1628533 Query 301872 AAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931 | ||||||||||||| || || | ||| || | |||||||||||| ||| || |||| Sbjct 1628532 ATAGTGGAAAGTATTGAGTGTCATTTGCGTTGCTGGCTCACCAATCGATTGAGCAGCAAC 1628473 Query 301932 CATACCAACCATTTCTCCTGG 301952 | ||| |||||||| ||||| Sbjct 1628472 AACACCTACCATTTCACCTGG 1628452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817241704403