Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1 114 1e-20 seq2 95.1 1e-14 >seq1 Length=4294417 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || ||||||| || || || || || || || |||||||| || | | Sbjct 3810511 ATGCAGATATTCGTTAAAACCCTCACGGGAAAGACGATCACTCTCGAAGTGGAGTCTTCG 3810570 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || || || ||||| || ||||| |||||| Sbjct 3810571 GACACCATTGACAATGTGAAGTCCAAGATTCAGGATAAGGAAGGTATTCCTCCTGATCAA 3810630 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || || ||||| ||||| || | | || || || || Sbjct 3810631 CAGCGATTGATCTTTGCTGGTAAGCAGCTTGAGGACGGTAGGACTCTCTCTGACTACAAT 3810690 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || |||||||| || || ||| | || ||||| || || || ||| Sbjct 3810691 ATCCAGAAGGAATCCACGCTTCACCTTGTCTTGCGTTTACGTGGTGGC 3810738 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || ||||||| || || || || | || || || | | Sbjct 3810283 ATGCAGATCTTTGTGAAGACTTTAACCGGCAAGACGATCACCTTGGAGGTGGAGTCGTCG 3810342 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||| || ||||| || || || || || || || Sbjct 3810343 GATACTATCGATAATGTGAAGTCAAAGATTCAGGACAAGGAGGGTATTCCACCTGACCAG 3810402 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||| || || || || || || |||||| | | |||| ||||| ||| Sbjct 3810403 CAGCGATTGATTTTCGCTGGTAAGCAACTTGAGGATGGCCGTACTTTGTCTGATTACAAC 3810462 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||||| ||||| || || || || | || ||||| Sbjct 3810463 ATTCAGAAGGAGTCCACTCTGCATCTCGTTTTGCG 3810497 >seq2 Length=2231275 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | || || || || ||||| || ||||| || || || || || | Sbjct 1212040 GATGCAGATTTTCGTCAAGACACTCACGGGTAAGACCATTACCCTTGAGGTTGAGTCCTC 1211981 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || || ||||| || ||||| || || || || || || || Sbjct 1211980 GGATACCATCGACAATGTTAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCA 1211921 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| ||||||||||| ||||| || ||||| |||||| | | | | || || || || Sbjct 1211920 ACAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACCCTCTCTGACTACAA 1211861 Query 24883 CATTCAAAAGGAATCGACACTACAC 24907 ||| || ||||| || || || ||| Sbjct 1211860 CATCCAGAAGGAGTCCACCCTTCAC 1211836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897493149320