Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq2 136 3e-27 seq1 123 2e-23 >seq2 Length=2231275 Score = 136 bits (150), Expect = 3e-27 Identities = 161/216 (75%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| |||| ||||||||| ||||| ||||| || ||| |||| |||| Sbjct 1211828 AGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCC 1211887 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||||||||||||||||| || || ||||| | || | ||||||||||| Sbjct 1211888 TCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGGATACCCTCCTTGTCC 1211947 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || | ||||| || || ||| || |||| ||| || Sbjct 1211948 TGAATCTTGCTCTTAAC--AT--TGTCGATGGTATCCGAGGACTCAACCTCAAGGGTAAT 1212003 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| |||||||| ||||| || || |||||||| Sbjct 1212004 GGTCTTACCCGTGAGTGTCTTGACGAAAATCTGCAT 1212039 >seq1 Length=4294417 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || ||||| | |||| ||||||||||||||| ||||| || || |||| |||| Sbjct 1826380 CAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCATC 1826321 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| |||||||| |||| || || || || | || | ||||||||||| Sbjct 1826320 CTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGGATTCCCTCCTTGTC 1826261 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || ||||| | || | || || ||| || |||| ||| ||||| Sbjct 1826260 CTGGATCTTGGACTTGACATTGTCAATAGTGTCCGAGGACTCAACCTCAAGGGTAATGGT 1826201 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| |||||||||||||| || || |||||||| Sbjct 1826200 CTTACCCGTGAGGGTCTTAACGAAAATCTGCAT 1826168 Score = 95.1 bits (104), Expect = 8e-15 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| || || || | | || |||| || |||||||| || ||||| Sbjct 3810474 CTCCTTCTGAATGTTGTAATCAGACAAAGTACGGCCATCCTCAAGTTGCTTACCAGCGAA 3810415 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||| ||| |||||||| | || | ||||||||||| | || ||| || || | Sbjct 3810414 AATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGAATCTTTGACTTCAC--A 3810357 Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961 | ||||||| || | ||| || || | ||| || ||||| || || | |||| Sbjct 3810356 T--TATCGATAGTATCCGACGACTCCACCTCCAAGGTGATCGTCTTGCCGGTTAAAGTCT 3810299 Query 34962 TTACAAAGATCTGCAT 34977 | |||||||||||||| Sbjct 3810298 TCACAAAGATCTGCAT 3810283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692724581761