Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq2 136 3e-27
seq1 123 2e-23
>seq2
Length=2231275
Score = 136 bits (150), Expect = 3e-27
Identities = 161/216 (75%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| |||| ||||||||| ||||| ||||| || ||| |||| ||||
Sbjct 1211828 AGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCC 1211887
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||||||||||||||||| || || ||||| | || | |||||||||||
Sbjct 1211888 TCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGGATACCCTCCTTGTCC 1211947
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || || || || | ||||| || || ||| || |||| ||| ||
Sbjct 1211948 TGAATCTTGCTCTTAAC--AT--TGTCGATGGTATCCGAGGACTCAACCTCAAGGGTAAT 1212003
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| |||||||| ||||| || || ||||||||
Sbjct 1212004 GGTCTTACCCGTGAGTGTCTTGACGAAAATCTGCAT 1212039
>seq1
Length=4294417
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| || ||||| | |||| ||||||||||||||| ||||| || || |||| ||||
Sbjct 1826380 CAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCATC 1826321
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| |||||||| |||| || || || || | || | |||||||||||
Sbjct 1826320 CTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGGATTCCCTCCTTGTC 1826261
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || ||||| | || | || || ||| || |||| ||| |||||
Sbjct 1826260 CTGGATCTTGGACTTGACATTGTCAATAGTGTCCGAGGACTCAACCTCAAGGGTAATGGT 1826201
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| |||||||||||||| || || ||||||||
Sbjct 1826200 CTTACCCGTGAGGGTCTTAACGAAAATCTGCAT 1826168
Score = 95.1 bits (104), Expect = 8e-15
Identities = 140/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||||||||| || || || | | || |||| || |||||||| || |||||
Sbjct 3810474 CTCCTTCTGAATGTTGTAATCAGACAAAGTACGGCCATCCTCAAGTTGCTTACCAGCGAA 3810415
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|||| ||| |||||||| | || | ||||||||||| | || ||| || || |
Sbjct 3810414 AATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGAATCTTTGACTTCAC--A 3810357
Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961
| ||||||| || | ||| || || | ||| || ||||| || || | ||||
Sbjct 3810356 T--TATCGATAGTATCCGACGACTCCACCTCCAAGGTGATCGTCTTGCCGGTTAAAGTCT 3810299
Query 34962 TTACAAAGATCTGCAT 34977
| ||||||||||||||
Sbjct 3810298 TCACAAAGATCTGCAT 3810283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692724581761
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |