Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq1 114 1e-20
>seq1
Length=4294417
Score = 114 bits (126), Expect = 1e-20
Identities = 167/236 (71%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || | || ||||||||| | || || ||||| || || |||||||| || || | |
Sbjct 1826394 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAA 1826335
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||||| ||| ||||| || || || || | ||||| | || |||||||| ||
Sbjct 1826334 AGAGTGCGGCCATCCTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGG 1826275
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||| ||||| || | || |||||| | || | |||||| || || ||
Sbjct 1826274 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCCGAGGACTCAACC 1826215
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAACG 29795
||||| || || || || || || | ||| ||||| || ||||||||||| ||||
Sbjct 1826214 TCAAGGGTAATGGTCTTACCCGTGAGGGTCTTAACGAAAATCTGCATTTTTTAACG 1826159
Score = 113 bits (124), Expect = 3e-20
Identities = 159/221 (72%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|||| || | ||| || ||||| || || |||||||| ||||| | | || || |
Sbjct 3810497 CGCAAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGACAAAGTACGGCCA 3810438
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || ||||| || ||||| | ||||||| ||||| || || ||||||||||| |||
Sbjct 3810437 TCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTG 3810378
Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
|| || ||| |||| || ||| | || | ||| || || || || || | || ||
Sbjct 3810377 TCCTG-AATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCACCTCCAAGGTGAT 3810319
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAA 29791
|| ||||| ||||| || || ||||| |||||||||| ||
Sbjct 3810318 CGTCTTGCCGGTTAAAGTCTTCACAAAGATCTGCATTTGAA 3810278
Score = 109 bits (120), Expect = 4e-19
Identities = 157/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGA 29628
||||||| || | |||||||||||||| || || || || || || | | || | |
Sbjct 3810728 AAACGCAAGACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGAGAGAGTCCTA 3810669
Query 29629 GAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCT 29688
|| || || || || |||||| | ||||||| || ||||| || |||||||| ||
Sbjct 3810668 CCGTCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGGAATACCTTCC 3810609
Query 29689 TTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGT 29747
|| || || ||| || | || ||| | || | ||||| ||| || ||||| |||||
Sbjct 3810608 TTATCCTG-AATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCACTTCGAGAGT 3810550
Query 29748 TATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || | ||||||||| |||||||||||
Sbjct 3810549 GATCGTCTTTCCCGTGAGGGTTTTAACGAATATCTGCAT 3810511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385219110797679
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |