Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1 123 2e-22 seq2 86.0 5e-11 >seq1 Length=4294417 Score = 123 bits (136), Expect = 2e-22 Identities = 304/457 (67%), Gaps = 8/457 (2%) Strand=Plus/Plus Query 282020 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 282079 ||||| || ||| | | || || | ||||| | || |||||||| || || | |||| Sbjct 702013 TCAATACCCTCGTAGAGCGAGTCGATCTCAATTGGGGTCTGAGTCGACGAGGACAATGCA 702072 Query 282080 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCA 282137 || || ||||| || || || || | | | || | ||| |||| ||| | | | Sbjct 702073 CGCTTGGCACGCTCGCAGGCGGTACGCAAACGACGAAGGGCAC--GCTGGTTGCCAGTGA 702130 Query 282138 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAA 282197 || | || ||||| | |||||| || | | | | || ||||| || || | Sbjct 702131 TGTCCTTCTTGTATTTGCGCTTGAACTCGGCGGCGAAGTGGTTGACGAGACGGTTGTCGA 702190 Query 282198 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 282257 |||||||||| || | | |||| || | || || |||| | ||| | || || | Sbjct 702191 AATCTTCACCACCAAGATGGGTATCACCAGCAGTGGCCTTTACCTCGAAGATACCCTCAT 702250 Query 282258 CAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 282317 ||| || | ||||| ||||| ||| |||||||| | ||| || || || ||||| Sbjct 702251 CAATGGAAAGAAGAGAGACATCGAAGGTACCACCACCAAGATCGAAGATCAGCACATTG- 702309 Query 282318 TTTCTTTGTCTTGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 282375 | || || || || || |||||||| || |||| ||| || || || || || || Sbjct 702310 -TGCTCACCCTCGGACTTCTTGTCAAGACCGTAGGCAATAGCGGCGGCGGTAGGCTCGTT 702368 Query 282376 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 282435 ||| || | | ||| || || ||||| || | || || ||||||||||| || | || Sbjct 702369 AATGATACGGAGAACGTTCAGGCCAGCGATCGTACCAGCGTCTTTAGTGGCCTGACGCTG 702428 Query 282436 TGAATCGTTAAAATATGCAGGAACAGTAATAACGGCA 282472 || || || || ||||||||||| || || || ||| Sbjct 702429 AGAGTCATTGAAGTATGCAGGAACGGTGATTACAGCA 702465 >seq2 Length=2231275 Score = 86.0 bits (94), Expect = 5e-11 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 || || || ||||| | |||||||||||||||||| | ||| |||| || | || ||| Sbjct 1627717 GAGTTCTTTTTCCATGCCATGGCTGGTCGTGAAGGTTTGATTGATACTGCAGTGAAGACT 1627776 Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTA 435244 || || || |||||||| |||||| ||||||||| | |||||||||| Sbjct 1627777 GCAGAGACAGGTTATATCCAAAGACGGCTTGTCAAGGCATTGGAAGATATTA 1627828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740629467180294