Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq1 123 2e-22
seq2 86.0 5e-11
>seq1
Length=4294417
Score = 123 bits (136), Expect = 2e-22
Identities = 304/457 (67%), Gaps = 8/457 (2%)
Strand=Plus/Plus
Query 282020 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 282079
||||| || ||| | | || || | ||||| | || |||||||| || || | ||||
Sbjct 702013 TCAATACCCTCGTAGAGCGAGTCGATCTCAATTGGGGTCTGAGTCGACGAGGACAATGCA 702072
Query 282080 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCA 282137
|| || ||||| || || || || | | | || | ||| |||| ||| | | |
Sbjct 702073 CGCTTGGCACGCTCGCAGGCGGTACGCAAACGACGAAGGGCAC--GCTGGTTGCCAGTGA 702130
Query 282138 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAA 282197
|| | || ||||| | |||||| || | | | | || ||||| || || |
Sbjct 702131 TGTCCTTCTTGTATTTGCGCTTGAACTCGGCGGCGAAGTGGTTGACGAGACGGTTGTCGA 702190
Query 282198 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 282257
|||||||||| || | | |||| || | || || |||| | ||| | || || |
Sbjct 702191 AATCTTCACCACCAAGATGGGTATCACCAGCAGTGGCCTTTACCTCGAAGATACCCTCAT 702250
Query 282258 CAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 282317
||| || | ||||| ||||| ||| |||||||| | ||| || || || |||||
Sbjct 702251 CAATGGAAAGAAGAGAGACATCGAAGGTACCACCACCAAGATCGAAGATCAGCACATTG- 702309
Query 282318 TTTCTTTGTCTTGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 282375
| || || || || || |||||||| || |||| ||| || || || || || ||
Sbjct 702310 -TGCTCACCCTCGGACTTCTTGTCAAGACCGTAGGCAATAGCGGCGGCGGTAGGCTCGTT 702368
Query 282376 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 282435
||| || | | ||| || || ||||| || | || || ||||||||||| || | ||
Sbjct 702369 AATGATACGGAGAACGTTCAGGCCAGCGATCGTACCAGCGTCTTTAGTGGCCTGACGCTG 702428
Query 282436 TGAATCGTTAAAATATGCAGGAACAGTAATAACGGCA 282472
|| || || || ||||||||||| || || || |||
Sbjct 702429 AGAGTCATTGAAGTATGCAGGAACGGTGATTACAGCA 702465
>seq2
Length=2231275
Score = 86.0 bits (94), Expect = 5e-11
Identities = 86/112 (77%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192
|| || || ||||| | |||||||||||||||||| | ||| |||| || | || |||
Sbjct 1627717 GAGTTCTTTTTCCATGCCATGGCTGGTCGTGAAGGTTTGATTGATACTGCAGTGAAGACT 1627776
Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTA 435244
|| || || |||||||| |||||| ||||||||| | ||||||||||
Sbjct 1627777 GCAGAGACAGGTTATATCCAAAGACGGCTTGTCAAGGCATTGGAAGATATTA 1627828
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740629467180294
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |