Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1 109 5e-19 seq2 95.1 1e-14 >seq1 Length=4294417 Score = 109 bits (120), Expect = 5e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| || | ||| | | | |||||||||||||| | Sbjct 1826365 GGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCA-TCCTCGAGCTGCTTAC 1826307 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| |||| | ||||| || || || ||||| || |||||||| |||||| || Sbjct 1826306 CGGCGAAAATCAAACGCTGTTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACT 1826247 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| ||||| | || ||| || || | ||| | ||| || || || || | Sbjct 1826246 TGACATTGTCAATAGTGTCCGAGGACTCAACCTCAAGGGTAATGGTCTTACCCGTGAGGG 1826187 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 1826186 TCTTAACGAAAATCTGCAT 1826168 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || |||||||| || || | | | ||||| || ||||| || Sbjct 3810479 GTGGACTCCTTCTGAATGTTGTAATCAGACAAAGTACGGCCA-TCCTCAAGTTGCTTACC 3810421 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| | ||||||||||| || || || || |||||||| |||||| ||| Sbjct 3810420 AGCGAAAATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGAATCTTTGACTT 3810361 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || || | | |||||| || | ||||| || |||||||| | ||| Sbjct 3810360 CACATTATCGATAGTATCCGACGACTCCACCTCCAAGGTGATCGTCTTGCCGGTTAAAGT 3810301 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 3810300 CTTCACAAAGATCTGCAT 3810283 Score = 82.4 bits (90), Expect = 7e-11 Identities = 105/142 (74%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 148817 CACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGAT 148876 || ||| | |||||| ||||||||||| || ||||| || |||| |||||| ||||| Sbjct 3285116 CAAGGCCAGAGAGGCAAGATTGCACACTGCAGTCTCCTCTGGGGACGAGTACTCAACGAT 3285057 Query 148877 CTCGGCGCACA-GATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGT 148935 |||| ||| | | ||| || | |||||| || | ||| | ||||| |||| || Sbjct 3285056 CTCGCAGCAAAGGTTTGATG-ACTTGATCGTACCAAGGTTTTGCTGATTAGATTTGCGGT 3284998 Query 148936 TGCACGCGTCCTTGTACAGCAT 148957 |||| || ||||| |||||||| Sbjct 3284997 TGCAGGCATCCTTATACAGCAT 3284976 >seq2 Length=2231275 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| || | ||| ||| | |||||||||||||| | Sbjct 1211842 GGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCA-TCCTCGAGCTGCTTTC 1211900 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || | ||||| ||||| || ||||| || |||||||| ||||| || Sbjct 1211901 CGGCGAAGATCAAACGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTGCTCT 1211960 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | || || | || ||| || || | ||| | ||| || || || || | Sbjct 1211961 TAACATTGTCGATGGTATCCGAGGACTCAACCTCAAGGGTAATGGTCTTACCCGTGAGTG 1212020 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 1212021 TCTTGACGAAAATCTGCAT 1212039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420685187560