Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1 190 5e-43 seq2 87.8 4e-12 >seq1 Length=4294417 Score = 190 bits (210), Expect = 5e-43 Identities = 507/766 (66%), Gaps = 19/766 (2%) Strand=Plus/Plus Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 ||| | ||||| |||||| | | | ||||| | ||||| ||||| | ||||| | Sbjct 3284256 GAAAGACCTCAGCACATGATAATGAGAGTTGCCGTGGGTATCCATGGCGAGGATATCCCA 3284315 Query 110424 GCTGTTATTGAATGTTATGA-TGTATTAAGTAAAAAGAAAGCT--ATTCATGCTACTCCT 110480 |||||| | ||| || | || || || | || || || |||||||| | ||| Sbjct 3284316 GCTGTTCTCGAAACCTACCAATGGAT---GTCACAAAAATACTTCATTCATGCCAGTCCA 3284372 Query 110481 ACCCTATTTAACGCAGGAACT--AATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAA 110538 ||||| | || ||||||||| || | |||| || |||| ||||| | || | Sbjct 3284373 ACCCTCTACAATGCAGGAACTCCAAAGCC--ACAAATGTCTTCCTGCTTCTTGGTAACGA 3284430 Query 110539 TTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTA 110598 | || |||||| |||||| ||||| |||||| | || || ||| ||| | ||||| | Sbjct 3284431 TGAAGGATGATAGTATTGATGGTATCTATGATACGCTCAAGGAATGTGCCTTGATTTCAA 3284490 Query 110599 AAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCG 110658 | || | ||||||||||| | |||| | ||||| | | || | | |||| Sbjct 3284491 AGAATGCCGGAGGAATTGGCCTCAGTATTCACAACATTCGTGCCACGGGCTCTTACATCG 3284550 Query 110659 CAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTG 110718 | | || ||| |||| | ||| ||| |||| ||||| | |||| ||| | |||| Sbjct 3284551 CTGGTACAAATGGTACTTCCAATGGGCTTATTCCCATGTTGCGTGTCTACAATAATACTG 3284610 Query 110719 CAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAAC 110775 | ||||| | ||||||||| ||| || ||| | ||||| || ||| | || | Sbjct 3284611 CTCGCTATGTTGACCAAGGTGGTAACAAGCGACCTGGTGCCTTTGCGATGTATATTGAGC 3284670 Query 110776 CTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAAC 110835 | |||||| ||||| ||||| | | || | || || ||||| || ||||| Sbjct 3284671 CGTGGCATGATGATATTTTTGATACCATTGATGTGCGCAAGAATCATGGTAAGGAAGAGA 3284730 Query 110836 AAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTC 110895 | || |||||| | || |||| | |||||| | || ||||| ||| | || || Sbjct 3284731 TTCGTGCCCGTGATATTTTCGTTGCACTTTGGATTCCCGACTTATTTATGCAGCGGGTGA 3284790 Query 110896 AAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTAT 110955 |||| ||||| ||| |||| |||||||| || | || ||||| |||||||| | Sbjct 3284791 AAGATAATGGGGACTGGACTCTAATGTGTCCCAATGAGTGCCCAGGTCTCTCTGATGTTT 3284850 Query 110956 ATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCA-AGTT--TCGCA 111012 | || | ||||| ||| | ||||| | ||||||||| || |||| || | ||||| Sbjct 3284851 ACGGTGAGGAGTTCGAAAAACTTTATACGACATATGAAAAGGAGGGCAGAGGTCGTCGCA 3284910 Query 111013 AACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAA 111072 ||| |||||| | || |||| || | || | ||| ||| ||||||| Sbjct 3284911 ---CCATTAAAGCTCAGAAGCTATGGTATTCCATTATAGAGGCTCAAACTGAGACTGGAA 3284967 Query 111073 CTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCA 111118 | || | ||| ||||||| ||| || |||||||||||||| Sbjct 3284968 CCCCATTTATGCTGTATAAGGATGCCTGCAACCGCAAATCTAATCA 3285013 Score = 96.9 bits (106), Expect = 8e-15 Identities = 100/131 (76%), Gaps = 4/131 (3%) Strand=Plus/Minus Query 110762 TATCTATCTC----GAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAA 110817 |||||||| | ||||| |||||| |||||||||| || || ||||| ||| | |||| Sbjct 927192 TATCTATCACCTTGGAACCGTGGCATGCAGATATATTGGACTTTTTAGATCTTAGAAAAA 927133 Query 110818 ATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATT 110877 |||| || ||||| | | || ||||||||||| |||||| | ||| | |||||| Sbjct 927132 ATCATGGTAAAGAAGAGCTCCGTGCTCGTGATTTATTCTATGCATTATGGGTCCCAGATT 927073 Query 110878 TATTCATGAAA 110888 | ||||||||| Sbjct 927072 TGTTCATGAAA 927062 >seq2 Length=2231275 Score = 87.8 bits (96), Expect = 4e-12 Identities = 130/183 (71%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||||| | || ||||| ||||||||||||| | ||||| ||||| || ||| | Sbjct 1626586 CATTTAATGGATGATGATCCGGTTCTGTTCAATCGTCAACCCAGTCTGCACAAGATGAGT 1626645 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCT 305428 |||||||||||| || |||||| | || | ||||| || | ||| | | || Sbjct 1626646 ATGATGGCTCATCGTGTTAAAGTAATGCCTTATTCTACATTCCGGCTCAATCT---TTCT 1626702 Query 305429 TGTACG---CCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485 ||| ||||||||||| ||||| ||||| ||||| ||||| |||| || ||||| Sbjct 1626703 GTGACGAGCCCTTATAATGCAGATTTCGATGGTGATGAGATGAACTTGCACGTTCCTCAG 1626762 Query 305486 TCA 305488 ||| Sbjct 1626763 TCA 1626765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812511085259