Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 8e-15 seq2 87.8 1e-12 >seq1 Length=4294417 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | || || || | ||| |||||| ||| || || ||||||||||| || Sbjct 3810510 ACCACCACGGAGGCGCAAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGA 3810451 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || || | || || | ||| || || || |||||||| |||||||| || | || Sbjct 3810450 CAAAGTACGGCCATCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGG 3810391 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || ||||| ||| || || | |||| || | || || || |||| Sbjct 3810390 AATACCCTCCTTGTCCTGAATCTT-TGACTTCACATTATCGATAGTATCCGACGACTCCA 3810332 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | |||||||| || || ||||| || || |||||||||||||| Sbjct 3810331 CCTCCAAGGTGATCGTCTTGCCGGTTAAAGTCTTCACAAAGATCTGCAT 3810283 >seq2 Length=2231275 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | | ||| | || | || || ||| ||| || || |||||||| || | Sbjct 1211811 CACCACCACGAAGACGAAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 1211870 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 |||| ||||| | || || | || |||||||| || ||||||||||| || || | | Sbjct 1211871 AGAGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGG 1211930 Query 33641 GCACACCTTCTTTGTCGGCAAT-TTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTC 33698 | | ||| || ||||| ||| || || || ||||| ||| | ||| || || || Sbjct 1211931 GGATACCCTCCTTGTCCTGAATCTTGCTCTT--AACATTGTCGATGGTATCCGAGGACTC 1211988 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||| || || || ||||| || | || || || || |||||||| Sbjct 1211989 AACCTCAAGGGTAATGGTCTTACCCGTGAGTGTCTTGACGAAAATCTGCAT 1212039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703923884480