Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1 147 2e-30 seq2 116 4e-21 >seq1 Length=4294417 Score = 147 bits (162), Expect = 2e-30 Identities = 165/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||||||||| || ||||| ||||| |||||||||||||| || ||| | Sbjct 1826385 AGACGCAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGG 1826326 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||| || || || |||||||||||||| ||||| || || || || || Sbjct 1826325 CCATCCTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGGATTCCCTCC 1826266 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | ||||| || || || || || || ||| Sbjct 1826265 TTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCCGAGGACTCAACCTCAAGGGTA 1826206 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 ||||| ||||| || | || ||||||||||| |||||||| Sbjct 1826205 ATGGTCTTACCCGTGAGGGTCTTAACGAAAATCTGCATTTT 1826165 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG 134558 ||||| || ||||| |||||||||||||| || || |||||||| | || | | Sbjct 3810725 CGCAAGACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGAGAGAGTCCTACCG 3810666 Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || ||||| || || ||||| ||||| ||||| ||||| || || || ||||| || Sbjct 3810665 TCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGGAATACCTTCCTTA 3810606 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 || ||||| || || || ||| | ||||| || || ||||| |||||||| || Sbjct 3810605 TCCTGAATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCACTTCGAGAGTGATC 3810546 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || | ||||||||||| || ||||| Sbjct 3810545 GTCTTTCCCGTGAGGGTTTTAACGAATATCTGCAT 3810511 Score = 111 bits (122), Expect = 2e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || || | ||| ||||| ||||| || || ||||| ||||| ||||||||||| || | | Sbjct 3810509 CCACCACGGAGGCGCAAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGAC 3810450 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | || || || || || || || |||||||| |||||||| || || || Sbjct 3810449 AAAGTACGGCCA-TCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGG 3810391 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || || || || ||||| ||| || || || | || || ||||| ||||| Sbjct 3810390 AATACCCTCCTTGTCCTGAATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCAC 3810331 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTT 134715 || | || || || || ||||||||||| || || || || ||||||| Sbjct 3810330 CTCCAAGGTGATCGTCTTGCCGGTTAAAGTCTTCACAAAGATCTGCATTT 3810281 >seq2 Length=2231275 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || ||||| ||||| || ||||||||||| | |||| || || ||| Sbjct 1211831 ACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCCTCG 1211890 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || || ||||||||||| || || || || || || || || || ||| Sbjct 1211891 AGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGA 1211950 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | || || || || || || || || |||||||| ||| Sbjct 1211951 ATCTTGCTCTTAACATTGTCGATGGTATCCGAGGACTCAACCTCAAGGGTAATGGTCTTA 1212010 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || |||||||| ||||| Sbjct 1212011 CCCGTGAGTGTCTTGACGAAAATCTGCAT 1212039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398279967880