Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1 297 3e-75 >seq1 Length=4294417 Score = 297 bits (328), Expect = 3e-75 Identities = 1365/2148 (64%), Gaps = 47/2148 (2%) Strand=Plus/Minus Query 68362 TCCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATA 68421 |||| ||| | || || ||||| || | ||||| | | |||||||| || |||||| Sbjct 3286036 TCCTGATCAACAGTGAATTGAATAGGGGCAGATGCAGCCTGAGTACGTAGGTAATACATA 3285977 Query 68422 CCGGTTTTCAGACC--TAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAAC 68479 || || |||| || | ||| ||||| ||||| ||||| || ||||| | Sbjct 3285976 CCTGTCTTCAATCCCTTTGAC--CATCCATAGAAGTGCATCGACGTAAGTTTTCCAATGG 3285919 Query 68480 TTGGATCGGCTATATGAATATTCAT-CGAT-TGACTTTGATCGATGAAAGCTCCTCTATC 68537 | || | |||||||| || | | | ||||| | || || | | ||| || Sbjct 3285918 TCGGTGCTTGCATATGAATGTTAAGACTCTGTGACT--GGTCAATATATGGGGCTCGCTC 3285861 Query 68538 TGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTT 68597 ||| ||||| | |||||| ||| || || ||||| | ||||| ||| |||||| Sbjct 3285860 TGCTGCCATATCAATAATAGCCTTCTGGCTGATCTCCCAGACCGTCTTGTAAAGCTGTTT 3285801 Query 68598 GATATCATCTGGAAGGCTCGT---ATTTTGAATGGATCCACCATCGGATATAATTATATT 68654 || ||||| || | || | ||||||||| || ||||| || | || | ||| Sbjct 3285800 CATGTCATCGGGGATATTCCTGAGATTTTGAATTGAACCACCCTCAGCAATTAGGCGATT 3285741 Query 68655 CTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAAC 68714 || || || ||||||||||| | || || | || | | || | || || || Sbjct 3285740 TTTCATGTCTTCATTCCACAAACCCATGTCAACTAGATCTTTCAAAAGGTAGGGGTTCAC 3285681 Query 68715 TATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCAC 68774 ||||| || || || | | ||| | ||||| |||| |||| |||||| || || | Sbjct 3285680 GATTTGGAACTCTCCTGCAAGCACACGACGAGAATAAAGATTAGAGGTATAAGGCTCAAA 3285621 Query 68775 AGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAA 68834 | |||||||| ||||| || || | || || ||||||||||| || ||||| | || Sbjct 3285620 ACATTCATTAAATCCCAATATCTGTGACGTAGACGCAGTTGGCATCGGAGCCACAAGTAG 3285561 Query 68835 ACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATC 68894 || | | ||||| | | ||| || ||||| | | ||| | ||| | ||| Sbjct 3285560 TGAGTTACGCAAACCATACTTAGCCAATTTCTCCTTTAGTTCATCCCAGTTCCATAAATC 3285501 Query 68895 AGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATT 68954 || || || | ||| || || |||| | | || || ||| || | Sbjct 3285500 AGTAGGCTCACGACCCCATAGGTCAAATTGCAATAAACCCTTGGAAGCAGGGCTACCTTC 3285441 Query 68955 ATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTA 69014 || ||||| ||||| || || || | |||| ||||| ||| | ||| ||| Sbjct 3285440 GTAAGTTTCGTAAGGACCAAACTCCCTCGCCAATTCAACACTTGACTCGAGTGCGGCGTG 3285381 Query 69015 ATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATA 69074 ||||||||||||||| |||| | || || | | | || || | || || |||||| Sbjct 3285380 ATAAATTGTTTCGAATATCTGGATGTTCAGCTGTCGAGCCTCAGGGCTGTCAAATGGAAG 3285321 Query 69075 ATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCT 69134 |||| || || | || ||||| || ||||| || | | || || | | | Sbjct 3285320 GCGTAACTCAAAGAAAGTGTCGGCCAACCCTTGAACACCTAGTGCAATTGGACGGTTCTT 3285261 Query 69135 CTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAG 69194 | | ||||||| |||||| | |||||| || ||| ||| |||| | || || Sbjct 3285260 CATGTTTGAACGCCTAGCTTCCTCCACAGGATAGTAGTTACGATCAATAACTCGGTTGAG 3285201 Query 69195 ATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCG---TCCATC 69251 ||| || | | ||| |||| || | ||||| | || ||| | | |||||| Sbjct 3285200 ATTCCGTGTGATGATTTTGGCCACATCATGAAGTTTTTGGAAGTCATACCAGATTCCATC 3285141 Query 69252 ----------TATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCT 69301 | || |||| || || | ||| || ||||| || ||||| || Sbjct 3285140 ACCAGTAGCTTCTACGAAACGCGGCAAG-GCCAGAGAGGCAAGATTGCACACTGCAGTCT 3285082 Query 69302 CATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCA 69361 | | | | || | | ||||| || || || | ||||| || || | Sbjct 3285081 CCTCTGGGGACGAGTACTCAACGATCTCGCAGCAAAGGTTTGATGACTTGATCGTACCAA 3285022 Query 69362 GATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAG 69421 | |||||||||||| || ||| ||||| ||||| || || ||||| || || |||| Sbjct 3285021 GGTTTTGCTGATTAGATTTGCGGTTGCAGGCATCCTTATACAGCATAAATGGGGTTCCAG 3284962 Query 69422 TTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGT-CTTG 69480 | ||| | |||| || ||||| || | ||| | | ||| || || ||| | Sbjct 3284961 TCTCAGTTTGAGCCTCTATAATGGAATACCATAGCTTCTGAGCTTTAAT---GGTGCGAC 3284905 Query 69481 TAACGCTTCTCT--TTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACAT 69538 | | || | || ||||||||| ||||| || |||||| || || || |||||| Sbjct 3284904 GACCTCTGCCCTCCTTTTCATATGTCGTATAAAGTTTTTCGAACTCCTCACCGTAAACAT 3284845 Query 69539 CATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTC 69598 || | || || || ||||| |||||||| | | ||| | ||| ||| || || | Sbjct 3284844 CAGAGAGACCTGGGCACTCATTGGGACACATTAGAGTCCAGTCCCCATTATCTTTCACCC 3284785 Query 69599 GTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTT 69658 | | |||||||| |||||||||||||| || | || | ||| | || | | | |||| Sbjct 3284784 GCTGCATAAATAAGTCGGGAATCCAAAGTGCAACGAAAATATCACGGGCACGAATCTCTT 3284725 Query 69659 CATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTA 69718 | || || ||| || | ||| | || | ||||||| |||||| || || | Sbjct 3284724 CCTTACCATGATTCTTGCGCACATCAATGGTATCAAAAATATCATCATGCCACGGCTCAA 3284665 Query 69719 GATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGT 69778 ||| ||||| | | | || ||||| || || || || || || | || | ||||| | Sbjct 3284664 TATACATCGCAAAGGCACCAGGTCGCTTGTTACCACCTTGGTCAACATAGCGAGCAGTAT 3284605 Query 69779 TATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATAT 69838 |||| ||||| | || ||| ||||||| ||||| || |||||||||| |||| || | Sbjct 3284604 TATTGTAGACACGCAACATGGGAATAAGCCCATTGGAAGTACCATTTGTACCAGCGATGT 3284545 Query 69839 AACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGA 69898 || || | || ||||| || |||| || || |||||||| || | || || | Sbjct 3284544 AAGAGCCCGTGGCACGAATGTTGTGAATACTGAGGCCAATTCCTCCGGCATTCTTTGAAA 3284485 Query 69899 TTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCAT-GTTA 69957 | | ||||| || | || ||||| ||||| || || |||||||| |||| |||| Sbjct 3284484 TCAAGGCACATTCCTTGAGCGTATCATAGATACCATCAATACTATCATCCTTCATCGTTA 3284425 Query 69958 AGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGAT 70017 ||| || ||| ||||||||| | | | |||||| ||||| | | || ||| Sbjct 3284424 CCAAG-AAGCAGGAAGACATTTGTGGCTTTGGAGTTCCTGCATTGTAGAGGGTTGGACTG 3284366 Query 70018 GCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCC 70077 || ||| |||| |||||| || | | | ||| ||||| | | | | | |||||| Sbjct 3284365 GCATGAATGAAGTATTTTTGTGACATCCATTGGTAGGTTTCGAGAACAGCTGGGATATCC 3284306 Query 70078 CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTC---TACCGTT 70134 ||| || || | || || | ||| | ||| |||||||||| ||| |||| Sbjct 3284305 TCGCCATGGATACCCACGGCAACTCTCATTATCATGTGCTGAGGTCTTTCCCATACC--- 3284249 Query 70135 TTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTAT 70194 ||| ||| |||| |||||||||| |||| || || || || || | ||| | Sbjct 3284248 TTACCATTATACTTCAGCAGGTATGATCGCTCCAATGTCTTGAATCCGAAGAAATTGAAA 3284189 Query 70195 GAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATA 70254 ||||||| || || | || | || |||||| |||| | | | || | | Sbjct 3284188 TTGAAGTCTCGATCATACACTATTGCCGAGTTTAGT---TCCTCAGCGTGCTTCACGACA 3284132 Query 70255 --TCCATAACAGTAGGT--GAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATA 70310 |||| | || | || || || ||| | | ||| |||||||| || Sbjct 3284131 GTGCCAT-AGAGCTCCTCCGATATCATTGGACTATGCCGGCGGTTTCGCGGATTAACGTA 3284073 Query 70311 GTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGA 70370 | | | ||||| ||| || || |||||| | ||||| || | |||||| | || || Sbjct 3284072 TTCATAAAGATCTTTCATAACCTCGCTAAATTGCTTTTTCGTCTGCTTGTGCAGGTTCGA 3284013 Query 70371 TATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGC 70430 | || || | ||||| |||| ||||| ||||| || ||||| | ||| || Sbjct 3284012 AACAGCGATACGAGCTGCAAGAACGGCATAATCAGGGTGAACGGTAGTCATATAAGCAGC 3283953 Query 70431 TATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATA 70478 |||| ||||||| | |||| ||| | || | |||||||| || Sbjct 3283952 AGTTTCGGCAGCTAGGTTGTCTAGTTCAACTGTGGATACTCCGTTGTA 3283905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908636859160