Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 2e-13 seq2 86.0 7e-12 >seq1 Length=4294417 Score = 91.5 bits (100), Expect = 2e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 |||||| || | | ||| |||| || || || ||||||||||| || |||| || Sbjct 3284262 CCTCAGCACATGATAATGAGAGTTGCCGTGGGTATCCATGGCGAGGATATCCCAGCTGTT 3284321 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 | ||| || ||| | |||| || || | ||||| || || | || ||||| | | Sbjct 3284322 CTCGAAACCTACCAATGGATGTCACAAAAATACTTCATTCATGCCAGTCCAACCCTCTAC 3284381 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282 || || || || || || || ||||| ||| ||| | || | ||||||||||| Sbjct 3284382 AATGCAGGAACTCCAAAGCCACAAATGTCTTCCTGCTTCTTGGTAACGATGAAGGATGAT 3284441 Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGC 19320 || ||||| || ||||| || ||||||||||| || || Sbjct 3284442 AGTATTGATGGTATCTATGATACGCTCAAGGAATGTGC 3284479 >seq2 Length=2231275 Score = 86.0 bits (94), Expect = 7e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 ||||| | ||||| | |||||||| | | || || |||||||| ||| || ||| Sbjct 2160651 TTTGCTGAGCGTCTTGTCGCTTTTGCGGCCATTGAGGGCGTCTTCTTCAGTGGGTCTTTC 2160592 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 | |||||||||||||| || ||||| |||||||| || |||| ||||| || ||| Sbjct 2160591 GCATCCATTTTCTGGCTCAAGAAACGTGGTCTCATGCCTGGGCTGACGTTCTCTAATGAG 2160532 Query 60093 CTGATTTCCCGGGACGAGGG 60112 || || || || || ||||| Sbjct 2160531 CTCATCTCACGAGATGAGGG 2160512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524669725360