Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1 143 3e-29 >seq1 Length=4294417 Score = 143 bits (158), Expect = 3e-29 Identities = 386/588 (66%), Gaps = 2/588 (0%) Strand=Plus/Plus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254 ||| | || ||| |||||||||| || || || | | ||| | || || ||| | Sbjct 3284277 ATGAGAGTTGCCGTGGGTATCCATGGCGAGGATATCCCAGCTGTTCTCGAAACCTACCAA 3284336 Query 53255 TTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAAT 53314 | ||| ||||| ||||| | || |||| |||||||| | ||| || || || Sbjct 3284337 TGGATGTCACAAAAATACTTCATTCATGCCAGTCCAACCCTCTACAATGCAGGAACTCCA 3284396 Query 53315 CACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATC 53374 | || || ||||| ||||||| |||| ||||||||||||| || || || ||| Sbjct 3284397 AAGCCACAAATGTCTTCCTGCTTCTTGGTAACGATGAAGGATGATAGTATTGATGGTATC 3284456 Query 53375 TACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434 || || ||||||||||| |||||| || || ||| | || || || || || | Sbjct 3284457 TATGATACGCTCAAGGAATGTGCCTTGATTTCAAAGAATGCCGGAGGAATTGGCCTC-AG 3284515 Query 53435 TGCTCG-AACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGG 53493 | || ||| | ||||| | ||| | ||| || || || || || |||| Sbjct 3284516 TATTCACAACATTCGTGCCACGGGCTCTTACATCGCTGGTACAAATGGTACTTCCAATGG 3284575 Query 53494 AATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGG 53553 | | || ||| | || |||| ||| || || || || || || |||| |||||| Sbjct 3284576 GCTTATTCCCATGTTGCGTGTCTACAATAATACTGCTCGCTATGTTGACCAAGGTGGTAA 3284635 Query 53554 GAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTT 53613 ||||| || | || || || || | ||||||||||| | || ||| | || Sbjct 3284636 CAAGCGACCTGGTGCCTTTGCGATGTATATTGAGCCGTGGCATGATGATATTTTTGATAC 3284695 Query 53614 TCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAGC 53673 | || |||| |||||| ||| | |||||||| || |||||| | || || Sbjct 3284696 CATTGATGTGCGCAAGAATCATGGTAAGGAAGAGATTCGTGCCCGTGATATTTTCGTTGC 3284755 Query 53674 TCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGAT 53733 || |||||||| ||| | || ||||| |||| | | | | ||| ||| || || Sbjct 3284756 ACTTTGGATTCCCGACTTATTTATGCAGCGGGTGAAAGATAATGGGGACTGGACTCTAAT 3284815 Query 53734 GTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781 ||| || || |||||||| || ||| | ||| |||||||||||||| Sbjct 3284816 GTGTCCCAATGAGTGCCCAGGTCTCTCTGATGTTTACGGTGAGGAGTT 3284863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215870036200