Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq2 179 4e-40 seq1 178 1e-39 >seq2 Length=2231275 Score = 179 bits (198), Expect = 4e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || || ||||| ||||| |||||||||||||| Sbjct 1212039 ATGCAGATTTTCGTCAAGACACTCACGGGTAAGACCATTACCCTTGAGGTTGAGTCCTCG 1211980 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | ||| || ||||||||||||||||| || || || ||||| Sbjct 1211979 GATACCATCGACAATGTTAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAA 1211920 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || || || || ||||| |||||||||| ||| ||||| | ||||| || Sbjct 1211919 CAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACCCTCTCTGACTACAAC 1211860 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| ||||| || ||| | |||||||| ||||| Sbjct 1211859 ATCCAGAAGGAGTCCACCCTTCACCTCGTCCTTCGTCTTCGTGGTGG 1211813 Score = 86.0 bits (94), Expect = 7e-12 Identities = 388/606 (64%), Gaps = 22/606 (4%) Strand=Plus/Minus Query 64297 TTCCCAATTAGGTACCCTGATTTGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGG 64356 ||||| || | ||||| || | ||| ||| ||||| || || || ||||| ||| Sbjct 2161068 TTCCCGATCAAGTACCACGAGATCTGGCAGCACTACAAAAAGGCAGAGGCGAGTTTTTGG 2161009 Query 64357 ACGGTCGAGGAGGTTGATCTCGCCAAGGATCTCAGCGACTGGGAAAACC---TAAACTCA 64413 || | ||||||| | || || | |||||| || |||||||||| | | | || | Sbjct 2161008 ACCGCCGAGGAGATCGACCTGGGCAAGGACCTTCACGACTGGGAACATCGTATGAATGCT 2160949 Query 64414 CAGGAACAGCACTTCAT--CAAGTTGGTCCTAGCATTCTTCGCATCAAGTGACGGAATTG 64471 | |||| | ||||| | || || || || || ||||| || ||||| || | Sbjct 2160948 GATGAACGTTATTTCATTTCCCGT--GTGCTTGCCTTTTTCGCGGCATCCGACGGTATCG 2160891 Query 64472 TGTTTGAGAATTTGGACCTAAATTTTACAAAGGATGTTCAGATCCCAGAGGCGCGGTCAT 64531 | || || |||| | |||||| | | || || |||||||| ||||| || | Sbjct 2160890 TCAACGAAAACTTGGTACAAAATTTCAGTGACGACGTCCAGATCCCCGAGGCTAAGTGCT 2160831 Query 64532 TCTATGCGTATCAGGGATTTAACGAAAGTATTCATGGCGAGACGTATTCGCTCATGATTG 64591 | |||| | ||| | | | || | ||| || |||||||| || || | |||| Sbjct 2160830 TTTATGGCTTCCAGATAATGATTGAGAATATCCACTCTGAGACGTACTCACTACTAATTG 2160771 Query 64592 ACAAGTTTGTTCGGGATCCTGTCGAGAAGG--ATGGACTGTTCAGGGCTATAGAGAC--- 64646 | | | | || |||||| ||||| || |||| | || || || | Sbjct 2160770 ATACCTATATTAAGGATCCCAA--AGAAGCTAATTATTTGTTTAATGCAATCGATAACAT 2160713 Query 64647 TGTACCCGCTGTTACTAAAAAGGCTGAATGGGCCATCCGGTGGATGAATCGT--GGGTCG 64704 || ||| | || ||||| || ||||| | || ||||| || || | | || Sbjct 2160712 TGGGCCCA---TCCGCAAGAAGGCCGACTGGGCTCTTCGCTGGATCAA-CGACAGAGACG 2160657 Query 64705 T--CGTTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGT 64762 | | |||| | ||||||| | |||||||| | || || | ||||| ||||| Sbjct 2160656 TTACTTTTGCTGAGCGTCTTGTCGCTTTTGCGGCCATTGAGGGCGTCTTCTTCAGTGGGT 2160597 Query 64763 CATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGA 64822 | ||| || ||||||||||| || || || || || ||||| || ||| |||| || | Sbjct 2160596 CTTTCGCATCCATTTTCTGGCTCAAGAAACGTGGTCTCATGCCTGGGCTGACGTTCTCTA 2160537 Query 64823 ACGAGCTGATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCC 64882 | ||||| ||||| || || ||||| | ||| || ||||| | ||||| ||| Sbjct 2160536 ATGAGCTCATCTCACGAGATGAGGGTATGCACACCGATTTTGCATGCGTCTTGTTCGGCC 2160477 Query 64883 ACCTCA 64888 | |||| Sbjct 2160476 ATCTCA 2160471 >seq1 Length=4294417 Score = 178 bits (196), Expect = 1e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| |||||||| ||||| | ||||||||||| || || | ||||| ||||| Sbjct 3810282 AATGCAGATCTTTGTGAAGACTTTAACCGGCAAGACGATCACCTTGGAGGTGGAGTCGTC 3810341 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| || | ||| ||||| | || ||||||||||||||||| ||||| || ||||| Sbjct 3810342 GGATACTATCGATAATGTGAAGTCAAAGATTCAGGACAAGGAGGGTATTCCACCTGACCA 3810401 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||| | ||||| |||||||||||||| ||||||| ||||| | | || || || Sbjct 3810402 GCAGCGATTGATTTTCGCTGGTAAGCAACTTGAGGATGGCCGTACTTTGTCTGATTACAA 3810461 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| |||||||| ||||| || ||||| || || ||||| Sbjct 3810462 CATTCAGAAGGAGTCCACTCTGCATCTCGTTTTGCGCCTCCGTGGTGG 3810509 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || || || || || ||||| || ||||| || || ||||| Sbjct 3810511 ATGCAGATATTCGTTAAAACCCTCACGGGAAAGACGATCACTCTCGAAGTGGAGTCTTCG 3810570 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| ||||| | || |||||||| ||||| || |||||||| || || Sbjct 3810571 GACACCATTGACAATGTGAAGTCCAAGATTCAGGATAAGGAAGGTATTCCTCCTGATCAA 3810630 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || |||||||||||||| || ||||| | | | || || | ||||| ||| Sbjct 3810631 CAGCGATTGATCTTTGCTGGTAAGCAGCTTGAGGACGGTAGGACTCTCTCTGACTACAAT 3810690 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||||||||| ||||| || ||||||||| | || ||||| Sbjct 3810691 ATCCAGAAGGAATCCACGCTTCACCTTGTCTTGCGTTTACGTGGTGG 3810737 Score = 159 bits (176), Expect = 4e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || ||||| || || || ||||| ||||| |||||||||||||| Sbjct 1826167 AATGCAGATTTTCGTTAAGACCCTCACGGGTAAGACCATTACCCTTGAGGTTGAGTCCTC 1826226 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| ||| | ||| | || || ||||||||||||||||| || || || || Sbjct 1826227 GGACACTATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCGGATCA 1826286 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||| | ||||| || |||||||| |||||||||| || || || | ||||| || Sbjct 1826287 ACAGCGTTTGATTTTCGCCGGTAAGCAGCTCGAGGATGGCCGCACTCTTTCTGACTACAA 1826346 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||||| || || || || ||||||| || ||||| Sbjct 1826347 CATTCAGAAGGAGTCCACCCTCCACCTCGTGCTGCGTCTGCGTGGTGG 1826394 Score = 109 bits (120), Expect = 6e-19 Identities = 662/1053 (63%), Gaps = 39/1053 (4%) Strand=Plus/Minus Query 80724 GTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGC 80783 ||| |||| || ||||| || | || || || |||| | |||| || ||| || Sbjct 3285302 GTCGGCCAACCCTTGAACACCTAGTGCAATTGGACGGTTCTTCATGTTTGAACGCCTAGC 3285243 Query 80784 CTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCG 80843 ||| | || || ||||| ||| || || ||||| || || ||||| | | Sbjct 3285242 TTCCTCCACAGGATAGTAGTTACGATCAATAACTCGGTTGAGATTCCGTGTGATGATTTT 3285183 Query 80844 TGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCC-----------CTTC-AC-AA 80890 | |||||||||||||| || ||||| | | | || |||| || || Sbjct 3285182 GGCCACATCATGAAGTTTTTGGAAGTCATACCAGATTCCATCACCAGTAGCTTCTACGAA 3285123 Query 80891 ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACT 80950 | || | ||||| ||| || || ||||||||||| || ||| || | | ||| Sbjct 3285122 ACGCGGCAAGGC-CAGAGAGGCAAGATTGCACACTGCAGTCTCCTCTGGGGACGAGTACT 3285064 Query 80951 CGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACT 81010 | ||||| || ||| | || || ||||| || ||||| ||||||| ||| || || | Sbjct 3285063 CAACGATCTCGCAGCAAAGGTTTGATGACTTGATCGTACCAAGGTTTTGCTGATTAGATT 3285004 Query 81011 TGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGA 81070 || |||||| || ||||| || ||| | ||||| || ||||| || | || | Sbjct 3285003 TGCGGTTGCAGGCATCCTTATACAGCATAAATGGGGTTCCAGTCTCAGTTTGAGCCTCTA 3284944 Query 81071 GGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCG--GAATT-TGCCTTCGGCCA 81127 |||| | ||| | || | || || | |||| || | |||| || Sbjct 3284943 TAATGGAATACCATAGCTTCTGAGCTTTAATGG---TGCGACGACCTCTGCCCTCCTTTT 3284887 Query 81128 CATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACT 81187 |||| | | ||| || ||||||| |||||| || |||| ||| ||||||||| Sbjct 3284886 CATATGTCGTATAAAGTTTTTCGAACTCCTCACCGTAAACATCAGAGAGACCTGGGCACT 3284827 Query 81188 CGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTA-CAGCC--TTCATGAAAGCGT 81244 | || || ||||| || |||||| | || ||| || || | ||| || || Sbjct 3284826 CATTGGGACACATTAGAGTCCAGTCCC---CATTATCTTTCACCCGCTGCATAAATAAGT 3284770 Query 81245 CAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGA 81304 | || ||||| || || ||| | || ||| || ||| || | ||| || || Sbjct 3284769 CGGGAATCCAAAGTGCAACGAAAATATCACGGGCACGAATCTCTTCCTTACCATGATTCT 3284710 Query 81305 GGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG 81364 ||||| || | || | || || ||||||| ||||| | ||||| || | | Sbjct 3284709 TGCGCACATCAATGGTATCAAAAATATCATCATGCCACGGCTCAATATACATCGCAAAGG 3284650 Query 81365 ACCC------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACAC 81418 || |||| || |||| |||| || || || ||||| || | |||| Sbjct 3284649 CACCAGGTCGCTTGTTAC---CACCTTGGTCAACATAGCGAGCAGTATTATTGTAGACAC 3284593 Query 81419 GCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGG 81478 ||||||| || || | |||| || ||| || ||||| |||| || ||| ||| Sbjct 3284592 GCAACATGGGAATAAGCCCATTGGAAGTACCATTTGTACCAGCGATGTAAGAGCCCGTGG 3284533 Query 81479 CGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACC 81538 | || | ||| || || || || || || | |||||||||| ||||| Sbjct 3284532 CACGAATGTTGTGAATACTGAGGCCAATTCCTCCGGCATTCTTTGAAATCAAGGCACATT 3284473 Query 81539 GGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGC 81598 || | || ||||| || || || || ||||| | ||||| | |||||| ||| Sbjct 3284472 CCTTGAGCGTATCATAGATACCATCAATACTATCATCCTTCATCGTTACCAAGAAGCAGG 3284413 Query 81599 TTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAA 81656 ||||| || || ||| ||| || |||||| | || ||||| | || |||||||| Sbjct 3284412 AAGACATTTGTGG--CTTTGGAGTTCCTGCATTGTAGAGGGTTGGACTGGCATGAATGAA 3284355 Query 81657 ATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAAT 81716 || | ||||||| | |||||||| || ||| ||||| || || || || Sbjct 3284354 GTATTTTTGTGACATCCATTGGTAGGTTTCGAGAACAGCTGGGATATCCTCGCCATGGAT 3284295 Query 81717 ACCGATAGCTACACGCATAAACATGTACTGGGG 81749 ||| | || || | ||| | ||||| ||| || Sbjct 3284294 ACCCACGGCAACTCTCATTATCATGTGCTGAGG 3284262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310264551280