Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq1 116 3e-21
seq2 95.1 1e-14
>seq1
Length=4294417
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || || || ||| | ||||| ||||| || || | ||
Sbjct 1826168 ATGCAGATTTTCGTTAAGACCCTCACGGGTAAGACCATTACCCTTGAGGTTGAGTCCTCG 1826227
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || || || ||||| || || || || || ||||||
Sbjct 1826228 GACACTATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCGGATCAA 1826287
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||||| || | |||||| || || | || || | || |||| || ||||||
Sbjct 1826288 CAGCGTTTGATTTTCGCCGGTAAGCAGCTCGAGGATGGCCGCACTCTTTCTGACTACAAC 1826347
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| |||||||| ||| | || | || ||||| |||| |||||
Sbjct 1826348 ATTCAGAAGGAGTCCACCCTCCACCTCGTGCTGCGTCTGCGTGGTGG 1826394
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||||||||| || ||||| || || || ||| | || ||||| |||||||| | ||
Sbjct 3810511 ATGCAGATATTCGTTAAAACCCTCACGGGAAAGACGATCACTCTCGAAGTGGAGTCTTCG 3810570
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || ||||| || || ||||| || || || ||||||
Sbjct 3810571 GACACCATTGACAATGTGAAGTCCAAGATTCAGGATAAGGAAGGTATTCCTCCTGATCAA 3810630
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| || || | || || || || | || ||| || ||| | || || |||||
Sbjct 3810631 CAGCGATTGATCTTTGCTGGTAAGCAGCTTGAGGACGGTAGGACTCTCTCTGACTACAAT 3810690
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| || ||||| || || | || | || |||||||| || ||||||
Sbjct 3810691 ATCCAGAAGGAATCCACGCTTCACCTTGTCTTGCGTTTACGTGGTGGC 3810738
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||| | ||||||||| | || || | || ||||| ||||
Sbjct 3810283 ATGCAGATCTTTGTGAAGACTTTAACCGGCAAGACGATCACCTTGGAGGTGGAGTCGTCG 3810342
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || || ||| ||||| ||||| || || || ||||| || ||
Sbjct 3810343 GATACTATCGATAATGTGAAGTCAAAGATTCAGGACAAGGAGGGTATTCCACCTGACCAG 3810402
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| || || | ||| || || ||| | || || | || | || |||||||||
Sbjct 3810403 CAGCGATTGATTTTCGCTGGTAAGCAACTTGAGGATGGCCGTACTTTGTCTGATTACAAC 3810462
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||| || | ||| | |||||||| | || ||||| ||
Sbjct 3810463 ATTCAGAAGGAGTCCACTCTGCATCTCGTTTTGCGCCTCCGTGGTGGTAT 3810512
>seq2
Length=2231275
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || || || ||| | ||||| ||||| || || | ||
Sbjct 1212039 ATGCAGATTTTCGTCAAGACACTCACGGGTAAGACCATTACCCTTGAGGTTGAGTCCTCG 1211980
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || || || ||||| ||||| || || || || || || |||
Sbjct 1211979 GATACCATCGACAATGTTAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAA 1211920
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||||| || | |||||| || || | || || || ||| | || || ||||||
Sbjct 1211919 CAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACCCTCTCTGACTACAAC 1211860
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||||| ||| | || | || | ||| | || |||||
Sbjct 1211859 ATCCAGAAGGAGTCCACCCTTCACCTCGTCCTTCGTCTTCGTGGTGG 1211813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918296706880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |