Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq2 170 4e-37
seq1 167 5e-36
>seq2
Length=2231275
Score = 170 bits (188), Expect = 4e-37
Identities = 171/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| |||||||| |||||||| || |||||||| || || | |||||
Sbjct 1211818 ACGAAGACGAAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGT 1211877
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || |||||||| || |||||||| | || ||||||||||| || | ||
Sbjct 1211878 GCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGGATACC 1211937
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||| ||||| || || || |||||||| || ||| |||||||| ||
Sbjct 1211938 CTCCTTGTCCTGAATCTTGCTCTTAACATTGTCGATGGTATCCGAGGACTCAACCTCAAG 1211997
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| |||||||| ||||| || || | ||||||
Sbjct 1211998 GGTAATGGTCTTACCCGTGAGTGTCTTGACGAAAATCTGCAT 1212039
>seq1
Length=4294417
Score = 167 bits (184), Expect = 5e-36
Identities = 163/210 (78%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964
|||||||||||| ||||| || || ||||| || || || | || ||||| || || ||
Sbjct 3810720 GACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGAGAGAGTCCTACCGTCCTC 3810661
Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024
|||||||| || || ||||| | || ||||| |||||||||| |||||||| |||||
Sbjct 3810660 AAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGGAATACCTTCCTTATCCTG 3810601
Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084
||||| ||||| || || |||||||| || || || |||||||||||||||||
Sbjct 3810600 AATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCACTTCGAGAGTGATCGTCTT 3810541
Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||||||| || || || || | ||||||
Sbjct 3810540 TCCCGTGAGGGTTTTAACGAATATCTGCAT 3810511
Score = 149 bits (164), Expect = 1e-30
Identities = 162/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || |||||||| || || ||||| || || | ||| || | |||||
Sbjct 1826379 AGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCC 1826320
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || ||||| || | || ||||| || || || | ||| |||||||||
Sbjct 1826319 TCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGGATTCCCTCCTTGTCC 1826260
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || || || ||||| ||| |||||||| || || || |||
Sbjct 1826259 TGGATCTTGGACTTGACATTGTCAATAGTGTCCGAGGACTCAACCTCAAGGGTAATGGTC 1826200
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| |||||||| ||||| || || | |||||||||
Sbjct 1826199 TTACCCGTGAGGGTCTTAACGAAAATCTGCATTTT 1826165
Score = 138 bits (152), Expect = 3e-27
Identities = 157/211 (74%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965
|| || || ||||||||||| || || ||||| ||||| | | || | ||||| ||
Sbjct 3810491 ACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGACAAAGTACGGCCATCCTCA 3810432
Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025
|| ||||| || ||||| || | || || |||||||| |||| || |||||||||||
Sbjct 3810431 AGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGA 3810372
Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085
|||||| ||||| || ||||| || || || || ||||| | |||||||||||
Sbjct 3810371 ATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCACCTCCAAGGTGATCGTCTTG 3810312
Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCATTT 211116
|| || | |||||| ||||| | ||||||||
Sbjct 3810311 CCGGTTAAAGTCTTCACAAAGATCTGCATTT 3810281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151717818935
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |