Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq1 131 1e-25
seq2 107 1e-18
>seq1
Length=4294417
Score = 131 bits (144), Expect = 1e-25
Identities = 151/201 (75%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|||||||||||||||||||| ||||||||||| || || || || || || ||||| |||
Sbjct 1826165 AAAATGCAGATTTTCGTTAAGACCCTCACGGGTAAGACCATTACCCTTGAGGTTGAGTCC 1826224
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
|||||||| |||| ||| | || | || || ||||| || || | || || ||
Sbjct 1826225 TCGGACACTATTGACAATGTCAAGTC-CAAGATCCAGGACAAGGAGGGAATCCCCCCGGA 1826283
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|||||||||||| || || ||||| || || || || || | |||||| | || ||
Sbjct 1826284 TCAACAGCGTTTGATTTTCGCCGGTAAGCAGCTCGAGGATGGCCGCACTCTTTCTGACTA 1826343
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| || || ||||||||
Sbjct 1826344 CAACATTCAGAAGGAGTCCAC 1826364
Score = 129 bits (142), Expect = 4e-25
Identities = 149/198 (75%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||||||||||||||||||||| ||||||||||||||||| || || ||
Sbjct 3810511 ATGCAGATATTCGTTAAAACCCTCACGGGAAAGACGATCACTCTCGAAGTGGAGTCTTCG 3810570
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || ||| || || |||||| | || || |||||
Sbjct 3810571 GACACCATTGACAATGTGAAGTC-CAAGATTCAGGATAAGGAAGGTATTCCTCCTGATCA 3810629
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| || || ||||| || || || || || |||| | ||| | || |||||
Sbjct 3810630 ACAGCGATTGATCTTTGCTGGTAAGCAGCTTGAGGACGGTAGGACTCTCTCTGACTACAA 3810689
Query 23790 CATACAAAAAGAGTCCAC 23807
|| || || || |||||
Sbjct 3810690 TATCCAGAAGGAATCCAC 3810707
Score = 93.3 bits (102), Expect = 3e-14
Identities = 153/218 (70%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 23606 TTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACT 23665
|| |||||||||| || || || || | || || || |||||||| | || || || |
Sbjct 3810278 TTCAAATGCAGATCTTTGTGAAGACTTTAACCGGCAAGACGATCACCTTGGAGGTGGAGT 3810337
Query 23666 CCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCA 23724
| |||| ||| | || ||| | || |||| | || ||||| || ||| | || ||
Sbjct 3810338 CGTCGGATACTATCGATAATGTGAAGTCAAAGA-TTCAGGACAAGGAGGGTATTCCACCT 3810396
Query 23725 GATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGAT 23784
|| || ||||| || || || || || || ||||| || || | || ||||| |||
Sbjct 3810397 GACCAGCAGCGATTGATTTTCGCTGGTAAGCAACTTGAGGATGGCCGTACTTTGTCTGAT 3810456
Query 23785 TACAACATACAAAAAGAGTCCACATTACATTTAGTTTT 23822
|||||||| || || |||||||| | ||| | |||||
Sbjct 3810457 TACAACATTCAGAAGGAGTCCACTCTGCATCTCGTTTT 3810494
>seq2
Length=2231275
Score = 107 bits (118), Expect = 1e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || |||||||| || || || || || || ||||| ||| ||
Sbjct 1212039 ATGCAGATTTTCGTCAAGACACTCACGGGTAAGACCATTACCCTTGAGGTTGAGTCCTCG 1211980
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || | || ||| |||| | || | || ||||| || ||| | || || || ||
Sbjct 1211979 GATACCATCGACAATGTTAAGAGCAAGA-TTCAGGACAAGGAGGGTATCCCCCCTGACCA 1211921
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||||||| || || ||||| || || || || || | ||||| | || |||||
Sbjct 1211920 ACAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACCCTCTCTGACTACAA 1211861
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||||||
Sbjct 1211860 CATCCAGAAGGAGTCCAC 1211843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009521729652
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |