Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1 293 3e-74 seq2 141 1e-28 >seq1 Length=4294417 Score = 293 bits (324), Expect = 3e-74 Identities = 1320/2068 (64%), Gaps = 49/2068 (2%) Strand=Plus/Minus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 || || ||||| || | |||||| | | |||||||| || |||||||| || || | Sbjct 3286024 GTGAATTGAATAGGGGCAGATGCAGCCTGAGTACGTAGGTAATACATACCTGTCTTCAAT 3285965 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 ||| |||||| ||||| ||||| || ||||| | | || | ||| Sbjct 3285964 CCCTTTGACCATCCATAGAAGTGCATCGACGTAAGTTTTCCAATGGTCGGTGCTTGCATA 3285905 Query 76902 TGAATATTCATCGACTGACTTTGA----TCGATGAAAGCTCCTCTATCAGCCGCCATTTT 76957 ||||| || | |||| || ||| || || | | ||| || || ||||| | Sbjct 3285904 TGAATGTTAA--GACT--CTGTGACTGGTCAATATATGGGGCTCGCTCTGCTGCCATATC 3285849 Query 76958 TATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGG 77017 ||||| | ||| || || ||||| | || ||| ||| ||||| || ||||| || Sbjct 3285848 AATAATAGCCTTCTGGCTGATCTCCCAGACCGTCTTGTAAAGCTGTTTCATGTCATCGGG 3285789 Query 77018 AAGGTTTGT---ATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATC 77074 | || | ||||||||| |||||||| || | || | ||| || || || || Sbjct 3285788 GATATTCCTGAGATTTTGAATTGAACCACCCTCAGCAATTAGGCGATTTTTCATGTCTTC 3285729 Query 77075 ATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTC 77134 ||||||||| | | || || | || | | || | || || || ||||| || || Sbjct 3285728 ATTCCACAAACCCATGTCAACTAGATCTTTCAAAAGGTAGGGGTTCACGATTTGGAACTC 3285669 Query 77135 TCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTT 77194 ||| | | || | ||||| |||| |||| |||||| || || | | ||||||| Sbjct 3285668 TCCTGCAAGCACACGACGAGAATAAAGATTAGAGGTATAAGGCTCAAAACATTCATTAAA 3285609 Query 77195 TCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAG 77254 |||||| || || | ||||| ||||||||||| || ||||| | || || | | Sbjct 3285608 TCCCAATATCTGTGACGTAGACGCAGTTGGCATCGGAGCCACAAGTAGTGAGTTACGCAA 3285549 Query 77255 ACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAAC 77314 ||||| | | ||| || ||||| | | ||| | ||| | ||| | ||| || Sbjct 3285548 ACCATACTTAGCCAATTTCTCCTTTAGTTCATCCCAGTTCCATAAATCAGTAGGCTCACG 3285489 Query 77315 ATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATA 77374 | |||| || || |||| | | || || |||| || | || ||||| || Sbjct 3285488 ACCCCATAGGTCAAATTGCAATAAACCCTTGGAAGCAGGGCTACCTTCGTAAGTTTCGTA 3285429 Query 77375 AGGTCCTT-CTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTT 77433 ||| || || || || | |||| ||| | || | ||| ||| ||||||||||| Sbjct 3285428 AGGACCAAACTCCCTC-GCCAATTCAACACTTGACTCGAGTGCGGCGTGATAAATTGTTT 3285370 Query 77434 CGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAA 77493 |||| |||| | || || | | | || ||| || ||||| ||| |||| || Sbjct 3285369 CGAATATCTGGATGTTCAGCTGTCGAGCCTCAGGGCTGTCAAATGGAAGGCGTAACTCAA 3285310 Query 77494 TAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAA 77553 || | || || || || ||||| || | |||| || | | || | || ||| Sbjct 3285309 AGAAAGTGTCGGCCAACCCTTGAACACCTAGTGCAATTGGACGGTTCTTCATGTTTGAAC 3285250 Query 77554 TTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAA 77613 ||||||| | |||||| || ||| || |||| | |||||||| | | Sbjct 3285249 GCCTAGCTTCCTCCACAGGATAGTAGTTACGATCAATAACTCGGTTGAGATTCCGTGTGA 3285190 Query 77614 CTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATC---TTCCATC----------T 77660 | ||| |||| || | ||||| | || ||| | | ||||||| | Sbjct 3285189 TGATTTTGGCCACATCATGAAGTTTTTGGAAGTCATACCAGATTCCATCACCAGTAGCTT 3285130 Query 77661 ATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTG 77720 || |||| | ||| || | ||| || ||||| || ||||| ||| | | | Sbjct 3285129 CTACGAAACGCGG-CAAGGCCAGAGAGGCAAGATTGCACACTGCAGTCTCCTCTGGGGAC 3285071 Query 77721 GCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGG 77780 | || | | |||||| || || || | ||||| || || || ||||| || Sbjct 3285070 GAGTACTCAACGATCTCGCAGCAAAGGTTTGATGACTTGATCGTACCAAGGTTTTGCTGA 3285011 Query 77781 TTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGT 77840 || || ||||| | |||||||| || ||||| || || || || ||| | || Sbjct 3285010 TTAGATTTGCGGTTGCAGGCATCCTTATACAGCATAAATGGGGTTCCAGTCTCAGTTTGA 3284951 Query 77841 GATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATCATA----GATTTGTATCGCC 77895 | || ||||| || | ||| | | ||| |||||| || | || | | ||| Sbjct 3284950 GCCTCTATAATGGAATACCATA-GCTTCTGAGCTTTAATGGTGCGACGACCTCT---GCC 3284895 Query 77896 TCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATC 77955 ||| |||||||| ||||| || ||| || || || || |||||||| | | Sbjct 3284894 -CTCCTTTTCATATGTCGTATAAAGTTTTTCGAACTCCTCACCGTAAACATCAGAGAGAC 3284836 Query 77956 CAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAA 78015 | ||||| ||||| || ||||| | | |||||| |||| || || || || | ||||| Sbjct 3284835 CTGGGCACTCATTGGGACACATTAGAGTCCAGTCCCCATTATCTTTCACCCGCTGCATAA 3284776 Query 78016 AGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTG 78075 | | || || ||||| || |||| || | ||| |||| | | ||||| || || Sbjct 3284775 ATAAGTCGGGAATCCAAAGTGCAACGAAAATATCACGGGCACGAATCTCTTCCTTACCAT 3284716 Query 78076 TATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTG 78135 |||||| | ||| | || | ||||||| |||||| || || | ||| || | Sbjct 3284715 GATTCTTGCGCACATCAATGGTATCAAAAATATCATCATGCCACGGCTCAATATACATCG 3284656 Query 78136 CCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAA 78195 | | | |||||||| || ||||| || || || | ||| | || || ||||| || | Sbjct 3284655 CAAAGGCACCAGGTCGCTTGTTACCACCTTGGTCAACATAGCGAGCAGTATTATTGTAGA 3284596 Query 78196 CTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCAC 78255 | | |||||| ||||||| || || || || |||||||| |||| || ||| || Sbjct 3284595 CACGCAACATGGGAATAAGCCCATTGGAAGTACCATTTGTACCAGCGATGTAAGAGCCCG 3284536 Query 78256 TTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGC 78315 | || ||||| || ||| | || |||||||| || |||| || || | || | Sbjct 3284535 TGGCACGAATGTTGTGAATACTGAGGCCAATTCCTCCGGCATTCTTTGAAATCAAGGCAC 3284476 Query 78316 AACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCAT-GTTAAGAAGAAAA 78374 | || | ||||| |||||||| || ||||| |||||| |||| |||| ||||| Sbjct 3284475 ATTCCTTGAGCGTATCATAGATACCATCAATACTATCATCCTTCATCGTTACCAAGAAG- 3284417 Query 78375 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTA 78434 ||| ||||||||| | | |||||||||||| | | || ||| ||||| | Sbjct 3284416 CAGGAAGACATTTGTGGCTTTGGAGTTCCTGCATTGTAGAGGGTTGGACTGGCATGAATG 3284357 Query 78435 AACCATTTTTCAGAAAGTAGATT-GTATGTTTCAATAGCTGATTCTATGTCCCATTGATG 78493 || |||||| || | | ||| ||| ||||| | | | | | || ||| ||| Sbjct 3284356 AAGTATTTTTGTGACA-TCCATTGGTAGGTTTCGAGAACAGCTGGGATATCCTCGCCATG 3284298 Query 78494 AATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGT--CTTATTATTT 78551 || || || || || | ||| | ||| |||||||||||||| || | |||| ||| Sbjct 3284297 GATACCCACGGCAACTCTCATTATCATGTGCTGAGGTCTTTC--CCATACCTTACCATTA 3284240 Query 78552 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 78611 |||| || ||||||| ||||| || || || || || | ||| | |||||| Sbjct 3284239 TACTTCAGCAGGTATGATCGCTCCAATGTCTTGAATCCGAAGAAATTGAAATTGAAGTCT 3284180 Query 78612 CTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATCCATGACA 78671 | || || | || | || ||||||| || || || ||| | |||| | | Sbjct 3284179 CGATCATACACTATTGCCGAGTTTAGTTCCTCAGCGTGCTTCACGACAGT-GCCAT-AGA 3284122 Query 78672 G-TAGT-TGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAAT 78729 | | | || || || ||| | | ||| |||||||| || | | | | || Sbjct 3284121 GCTCCTCCGATATCATTGGACTATGCCGGCGGTTTCGCGGATTAACGTATTCATAAAGAT 3284062 Query 78730 CTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTC 78789 ||| ||| || || |||||| | ||||| || | |||||| || || || ||||| || | Sbjct 3284061 CTTTCATAACCTCGCTAAATTGCTTTTTCGTCTGCTTGTGCAGGTTCGAAACAGCGATAC 3284002 Query 78790 TTGCAGCTAGAATAGCATAATCAGGATG 78817 || || |||| ||||||||||| || Sbjct 3284001 GAGCTGCAAGAACGGCATAATCAGGGTG 3283974 >seq2 Length=2231275 Score = 141 bits (156), Expect = 1e-28 Identities = 408/623 (65%), Gaps = 16/623 (3%) Strand=Plus/Plus Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200 ||||||||||| || | ||| ||||||| || | || ||||| || || || Sbjct 2160491 CATGCAAAATCGGTGTGCATACCCTCATCTCGTGAGATGAGCTCATTAGAGAACGTCAGC 2160550 Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260 || ||||| || |||||||| |||||||| || || | |||||||| ||| ||||| Sbjct 2160551 CCAGGCATGAGACCACGTTTCTTGAGCCAGAAAATGGATGCGAAAGACCCACTGAAGAAG 2160610 Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCC----GTAACTGGCTTCGTTGTG 48316 | ||| || | ||||||||| ||| ||| | ||| | ||||| | || || || Sbjct 2160611 ACGCCCTCAATGGCCGCAAAAGCGACAAGACGCTCAGCAAAAGTAAC-GTCTCTGTCGTT 2160669 Query 48317 TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGG---CATTGTT-TCTATAG 48372 ||||| || | ||||| || |||||| || | | || || |||| || || | Sbjct 2160670 GATCCAGCGAAGAGCCCAGTCGGCCTTC----TTGCGGATGGGCCCAATGTTATCGATTG 2160725 Query 48373 CATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTAT 48432 ||||||| | | | || ||| ||| ||| |||| || ||||| |||| || | Sbjct 2160726 CATTAAACAAATAATTAGCTTCTTTGGGATCCTTAATATAGGTATCAATTAGTAGTGAGT 2160785 Query 48433 ACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTG 48492 || | || ||||| ||||| ||||| ||||| || || ||||| || | || || | Sbjct 2160786 ACGTCTCAGAGTGGATATTCTCAATCATTATCTGGAAGCCATAAAAGCACTTAGCCTCGG 2160845 Query 48493 TGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAG 48552 |||||| || || || || || |||| || || || || || || || | Sbjct 2160846 GGATCTGGACGTCGTCACTGAAATTTTGTACCAAGTTTTCGTTGACGATACCGTCGGATG 2160905 Query 48553 CAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA---GTTTAT 48609 | || ||||| || | ||| | ||| ||||| ||| | | | ||| | | | Sbjct 2160906 CCGCGAAAAAGGCAAGCACACGGGAAATGAAATAACGTTCATCAGCATTCATACGATGTT 2160965 Query 48610 TCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTG 48669 |||||| | | || || | || | || || || |||||||| ||||||| Sbjct 2160966 CCCAGTCGTGAAGGTCCTTGCCCAGGTCGATCTCCTCGGCGGTCCAAAAACTCGCCTCTG 2161025 Query 48670 CTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCTATTTG 48729 | ||||| || | ||| || || ||| | ||| ||||| || ||||| |||| || Sbjct 2161026 CCTTTTTGTAGTGCTGCCAGATCTCGTGGTACTTGATCGGGAACATCACAAACCTATGTG 2161085 Query 48730 GATTTTTTGCAAGGATAGGTTCC 48752 | || | ||||||||| ||| Sbjct 2161086 GGTTCTCCTTAAGGATAGGCTCC 2161108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668635016160