Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1 293 3e-74
seq2 141 1e-28
>seq1
Length=4294417
Score = 293 bits (324), Expect = 3e-74
Identities = 1320/2068 (64%), Gaps = 49/2068 (2%)
Strand=Plus/Minus
Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841
|| || ||||| || | |||||| | | |||||||| || |||||||| || || |
Sbjct 3286024 GTGAATTGAATAGGGGCAGATGCAGCCTGAGTACGTAGGTAATACATACCTGTCTTCAAT 3285965
Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901
||| |||||| ||||| ||||| || ||||| | | || | |||
Sbjct 3285964 CCCTTTGACCATCCATAGAAGTGCATCGACGTAAGTTTTCCAATGGTCGGTGCTTGCATA 3285905
Query 76902 TGAATATTCATCGACTGACTTTGA----TCGATGAAAGCTCCTCTATCAGCCGCCATTTT 76957
||||| || | |||| || ||| || || | | ||| || || ||||| |
Sbjct 3285904 TGAATGTTAA--GACT--CTGTGACTGGTCAATATATGGGGCTCGCTCTGCTGCCATATC 3285849
Query 76958 TATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGG 77017
||||| | ||| || || ||||| | || ||| ||| ||||| || ||||| ||
Sbjct 3285848 AATAATAGCCTTCTGGCTGATCTCCCAGACCGTCTTGTAAAGCTGTTTCATGTCATCGGG 3285789
Query 77018 AAGGTTTGT---ATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATC 77074
| || | ||||||||| |||||||| || | || | ||| || || || ||
Sbjct 3285788 GATATTCCTGAGATTTTGAATTGAACCACCCTCAGCAATTAGGCGATTTTTCATGTCTTC 3285729
Query 77075 ATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTC 77134
||||||||| | | || || | || | | || | || || || ||||| || ||
Sbjct 3285728 ATTCCACAAACCCATGTCAACTAGATCTTTCAAAAGGTAGGGGTTCACGATTTGGAACTC 3285669
Query 77135 TCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTT 77194
||| | | || | ||||| |||| |||| |||||| || || | | |||||||
Sbjct 3285668 TCCTGCAAGCACACGACGAGAATAAAGATTAGAGGTATAAGGCTCAAAACATTCATTAAA 3285609
Query 77195 TCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAG 77254
|||||| || || | ||||| ||||||||||| || ||||| | || || | |
Sbjct 3285608 TCCCAATATCTGTGACGTAGACGCAGTTGGCATCGGAGCCACAAGTAGTGAGTTACGCAA 3285549
Query 77255 ACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAAC 77314
||||| | | ||| || ||||| | | ||| | ||| | ||| | ||| ||
Sbjct 3285548 ACCATACTTAGCCAATTTCTCCTTTAGTTCATCCCAGTTCCATAAATCAGTAGGCTCACG 3285489
Query 77315 ATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATA 77374
| |||| || || |||| | | || || |||| || | || ||||| ||
Sbjct 3285488 ACCCCATAGGTCAAATTGCAATAAACCCTTGGAAGCAGGGCTACCTTCGTAAGTTTCGTA 3285429
Query 77375 AGGTCCTT-CTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTT 77433
||| || || || || | |||| ||| | || | ||| ||| |||||||||||
Sbjct 3285428 AGGACCAAACTCCCTC-GCCAATTCAACACTTGACTCGAGTGCGGCGTGATAAATTGTTT 3285370
Query 77434 CGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAA 77493
|||| |||| | || || | | | || ||| || ||||| ||| |||| ||
Sbjct 3285369 CGAATATCTGGATGTTCAGCTGTCGAGCCTCAGGGCTGTCAAATGGAAGGCGTAACTCAA 3285310
Query 77494 TAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAA 77553
|| | || || || || ||||| || | |||| || | | || | || |||
Sbjct 3285309 AGAAAGTGTCGGCCAACCCTTGAACACCTAGTGCAATTGGACGGTTCTTCATGTTTGAAC 3285250
Query 77554 TTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAA 77613
||||||| | |||||| || ||| || |||| | |||||||| | |
Sbjct 3285249 GCCTAGCTTCCTCCACAGGATAGTAGTTACGATCAATAACTCGGTTGAGATTCCGTGTGA 3285190
Query 77614 CTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATC---TTCCATC----------T 77660
| ||| |||| || | ||||| | || ||| | | ||||||| |
Sbjct 3285189 TGATTTTGGCCACATCATGAAGTTTTTGGAAGTCATACCAGATTCCATCACCAGTAGCTT 3285130
Query 77661 ATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTG 77720
|| |||| | ||| || | ||| || ||||| || ||||| ||| | | |
Sbjct 3285129 CTACGAAACGCGG-CAAGGCCAGAGAGGCAAGATTGCACACTGCAGTCTCCTCTGGGGAC 3285071
Query 77721 GCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGG 77780
| || | | |||||| || || || | ||||| || || || ||||| ||
Sbjct 3285070 GAGTACTCAACGATCTCGCAGCAAAGGTTTGATGACTTGATCGTACCAAGGTTTTGCTGA 3285011
Query 77781 TTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGT 77840
|| || ||||| | |||||||| || ||||| || || || || ||| | ||
Sbjct 3285010 TTAGATTTGCGGTTGCAGGCATCCTTATACAGCATAAATGGGGTTCCAGTCTCAGTTTGA 3284951
Query 77841 GATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATCATA----GATTTGTATCGCC 77895
| || ||||| || | ||| | | ||| |||||| || | || | | |||
Sbjct 3284950 GCCTCTATAATGGAATACCATA-GCTTCTGAGCTTTAATGGTGCGACGACCTCT---GCC 3284895
Query 77896 TCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATC 77955
||| |||||||| ||||| || ||| || || || || |||||||| | |
Sbjct 3284894 -CTCCTTTTCATATGTCGTATAAAGTTTTTCGAACTCCTCACCGTAAACATCAGAGAGAC 3284836
Query 77956 CAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAA 78015
| ||||| ||||| || ||||| | | |||||| |||| || || || || | |||||
Sbjct 3284835 CTGGGCACTCATTGGGACACATTAGAGTCCAGTCCCCATTATCTTTCACCCGCTGCATAA 3284776
Query 78016 AGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTG 78075
| | || || ||||| || |||| || | ||| |||| | | ||||| || ||
Sbjct 3284775 ATAAGTCGGGAATCCAAAGTGCAACGAAAATATCACGGGCACGAATCTCTTCCTTACCAT 3284716
Query 78076 TATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTG 78135
|||||| | ||| | || | ||||||| |||||| || || | ||| || |
Sbjct 3284715 GATTCTTGCGCACATCAATGGTATCAAAAATATCATCATGCCACGGCTCAATATACATCG 3284656
Query 78136 CCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAA 78195
| | | |||||||| || ||||| || || || | ||| | || || ||||| || |
Sbjct 3284655 CAAAGGCACCAGGTCGCTTGTTACCACCTTGGTCAACATAGCGAGCAGTATTATTGTAGA 3284596
Query 78196 CTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCAC 78255
| | |||||| ||||||| || || || || |||||||| |||| || ||| ||
Sbjct 3284595 CACGCAACATGGGAATAAGCCCATTGGAAGTACCATTTGTACCAGCGATGTAAGAGCCCG 3284536
Query 78256 TTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGC 78315
| || ||||| || ||| | || |||||||| || |||| || || | || |
Sbjct 3284535 TGGCACGAATGTTGTGAATACTGAGGCCAATTCCTCCGGCATTCTTTGAAATCAAGGCAC 3284476
Query 78316 AACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCAT-GTTAAGAAGAAAA 78374
| || | ||||| |||||||| || ||||| |||||| |||| |||| |||||
Sbjct 3284475 ATTCCTTGAGCGTATCATAGATACCATCAATACTATCATCCTTCATCGTTACCAAGAAG- 3284417
Query 78375 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTA 78434
||| ||||||||| | | |||||||||||| | | || ||| ||||| |
Sbjct 3284416 CAGGAAGACATTTGTGGCTTTGGAGTTCCTGCATTGTAGAGGGTTGGACTGGCATGAATG 3284357
Query 78435 AACCATTTTTCAGAAAGTAGATT-GTATGTTTCAATAGCTGATTCTATGTCCCATTGATG 78493
|| |||||| || | | ||| ||| ||||| | | | | | || ||| |||
Sbjct 3284356 AAGTATTTTTGTGACA-TCCATTGGTAGGTTTCGAGAACAGCTGGGATATCCTCGCCATG 3284298
Query 78494 AATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGT--CTTATTATTT 78551
|| || || || || | ||| | ||| |||||||||||||| || | |||| |||
Sbjct 3284297 GATACCCACGGCAACTCTCATTATCATGTGCTGAGGTCTTTC--CCATACCTTACCATTA 3284240
Query 78552 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 78611
|||| || ||||||| ||||| || || || || || | ||| | ||||||
Sbjct 3284239 TACTTCAGCAGGTATGATCGCTCCAATGTCTTGAATCCGAAGAAATTGAAATTGAAGTCT 3284180
Query 78612 CTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATCCATGACA 78671
| || || | || | || ||||||| || || || ||| | |||| | |
Sbjct 3284179 CGATCATACACTATTGCCGAGTTTAGTTCCTCAGCGTGCTTCACGACAGT-GCCAT-AGA 3284122
Query 78672 G-TAGT-TGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAAT 78729
| | | || || || ||| | | ||| |||||||| || | | | | ||
Sbjct 3284121 GCTCCTCCGATATCATTGGACTATGCCGGCGGTTTCGCGGATTAACGTATTCATAAAGAT 3284062
Query 78730 CTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTC 78789
||| ||| || || |||||| | ||||| || | |||||| || || || ||||| || |
Sbjct 3284061 CTTTCATAACCTCGCTAAATTGCTTTTTCGTCTGCTTGTGCAGGTTCGAAACAGCGATAC 3284002
Query 78790 TTGCAGCTAGAATAGCATAATCAGGATG 78817
|| || |||| ||||||||||| ||
Sbjct 3284001 GAGCTGCAAGAACGGCATAATCAGGGTG 3283974
>seq2
Length=2231275
Score = 141 bits (156), Expect = 1e-28
Identities = 408/623 (65%), Gaps = 16/623 (3%)
Strand=Plus/Plus
Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200
||||||||||| || | ||| ||||||| || | || ||||| || || ||
Sbjct 2160491 CATGCAAAATCGGTGTGCATACCCTCATCTCGTGAGATGAGCTCATTAGAGAACGTCAGC 2160550
Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260
|| ||||| || |||||||| |||||||| || || | |||||||| ||| |||||
Sbjct 2160551 CCAGGCATGAGACCACGTTTCTTGAGCCAGAAAATGGATGCGAAAGACCCACTGAAGAAG 2160610
Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCC----GTAACTGGCTTCGTTGTG 48316
| ||| || | ||||||||| ||| ||| | ||| | ||||| | || || ||
Sbjct 2160611 ACGCCCTCAATGGCCGCAAAAGCGACAAGACGCTCAGCAAAAGTAAC-GTCTCTGTCGTT 2160669
Query 48317 TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGG---CATTGTT-TCTATAG 48372
||||| || | ||||| || |||||| || | | || || |||| || || |
Sbjct 2160670 GATCCAGCGAAGAGCCCAGTCGGCCTTC----TTGCGGATGGGCCCAATGTTATCGATTG 2160725
Query 48373 CATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTAT 48432
||||||| | | | || ||| ||| ||| |||| || ||||| |||| || |
Sbjct 2160726 CATTAAACAAATAATTAGCTTCTTTGGGATCCTTAATATAGGTATCAATTAGTAGTGAGT 2160785
Query 48433 ACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTG 48492
|| | || ||||| ||||| ||||| ||||| || || ||||| || | || || |
Sbjct 2160786 ACGTCTCAGAGTGGATATTCTCAATCATTATCTGGAAGCCATAAAAGCACTTAGCCTCGG 2160845
Query 48493 TGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAG 48552
|||||| || || || || || |||| || || || || || || || |
Sbjct 2160846 GGATCTGGACGTCGTCACTGAAATTTTGTACCAAGTTTTCGTTGACGATACCGTCGGATG 2160905
Query 48553 CAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA---GTTTAT 48609
| || ||||| || | ||| | ||| ||||| ||| | | | ||| | | |
Sbjct 2160906 CCGCGAAAAAGGCAAGCACACGGGAAATGAAATAACGTTCATCAGCATTCATACGATGTT 2160965
Query 48610 TCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTG 48669
|||||| | | || || | || | || || || |||||||| |||||||
Sbjct 2160966 CCCAGTCGTGAAGGTCCTTGCCCAGGTCGATCTCCTCGGCGGTCCAAAAACTCGCCTCTG 2161025
Query 48670 CTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCTATTTG 48729
| ||||| || | ||| || || ||| | ||| ||||| || ||||| |||| ||
Sbjct 2161026 CCTTTTTGTAGTGCTGCCAGATCTCGTGGTACTTGATCGGGAACATCACAAACCTATGTG 2161085
Query 48730 GATTTTTTGCAAGGATAGGTTCC 48752
| || | ||||||||| |||
Sbjct 2161086 GGTTCTCCTTAAGGATAGGCTCC 2161108
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668635016160
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