Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1 325 6e-84 seq2 107 3e-18 >seq1 Length=4294417 Score = 325 bits (360), Expect = 6e-84 Identities = 1377/2145 (64%), Gaps = 56/2145 (3%) Strand=Plus/Minus Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431 |||| ||||| ||||| || | ||||| | | |||||||| || |||||||| || | Sbjct 3286029 CAACAGTGAATTGAATAGGGGCAGATGCAGCCTGAGTACGTAGGTAATACATACCTGTCT 3285970 Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491 | | ||| |||||| ||||| ||||| || ||||| | |||| | Sbjct 3285969 TCAATCCCTTTGACCATCCATAGAAGTGCATCGACGTAAGTTTTCCAATGGTCGGTGCTT 3285910 Query 75492 CTATATGAATATTCATCGACTGACTTTGA----TCGATGAAAGCTCCTCTATCAGCCGCC 75547 |||||||| || | |||| || ||| || || | | ||| || || ||| Sbjct 3285909 GCATATGAATGTTAA--GACT--CTGTGACTGGTCAATATATGGGGCTCGCTCTGCTGCC 3285854 Query 75548 ATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCA 75607 || | ||||| | ||| || || ||||| | || ||| ||| ||||| || ||| Sbjct 3285853 ATATCAATAATAGCCTTCTGGCTGATCTCCCAGACCGTCTTGTAAAGCTGTTTCATGTCA 3285794 Query 75608 TCTGGAAGATTTGT---ATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATC 75664 || || | ||| | ||||||||| || || || |||| || | ||| || || Sbjct 3285793 TCGGGGATATTCCTGAGATTTTGAATTGAACCACCCTCAGCAATTAGGCGATTTTTCATG 3285734 Query 75665 TCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGA 75724 || ||||||||||| | || || | || | | || | || || || ||||| Sbjct 3285733 TCTTCATTCCACAAACCCATGTCAACTAGATCTTTCAAAAGGTAGGGGTTCACGATTTGG 3285674 Query 75725 AATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCA 75784 || ||||| | | || | |||| |||| |||| |||||| || || | | ||||| Sbjct 3285673 AACTCTCCTGCAAGCACACGACGAGAATAAAGATTAGAGGTATAAGGCTCAAAACATTCA 3285614 Query 75785 TTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTT 75844 || |||||| || || | || || ||||| ||||| || ||||| | || || Sbjct 3285613 TTAAATCCCAATATCTGTGACGTAGACGCAGTTGGCATCGGAGCCACAAGTAGTGAGTTA 3285554 Query 75845 CTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGT 75904 | | ||||| | | ||| || ||||| | | ||| | ||| | ||| | || Sbjct 3285553 CGCAAACCATACTTAGCCAATTTCTCCTTTAGTTCATCCCAGTTCCATAAATCAGTAGGC 3285494 Query 75905 ACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTT 75964 || | |||| || || |||| | | || ||| |||| || | || ||| Sbjct 3285493 TCACGACCCCATAGGTCAAATTGCAATAAACCCTTGGAAGCAGGGCTACCTTCGTAAGTT 3285434 Query 75965 TCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATT 76024 ||||||| || || || | ||| ||| | ||| | || ||| ||||||| Sbjct 3285433 TCGTAAGGACCAAACTCCCTCGCCAATTCAACACTTGACTCGAGTGCGGCGTGATAAATT 3285374 Query 76025 GTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAA 76084 |||||||| |||| | || || | | | || ||| | || ||||| ||| |||| Sbjct 3285373 GTTTCGAATATCTGGATGTTCAGCTGTCGAGCCTCAGGGCTGTCAAATGGAAGGCGTAAC 3285314 Query 76085 AGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTG 76144 || || | || || | || ||||| || | |||| || | | || | || Sbjct 3285313 TCAAAGAAAGTGTCGGCCAACCCTTGAACACCTAGTGCAATTGGACGGTTCTTCATGTTT 3285254 Query 76145 GAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTG 76204 ||| |||||| | ||| || || ||| ||| |||| | |||||||| | Sbjct 3285253 GAACGCCTAGCTTCCTCCACAGGATAGTAGTTACGATCAATAACTCGGTTGAGATTCCGT 3285194 Query 76205 ACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATT---TTCCATC-----TA 76256 | | ||| |||| || | ||||| | || ||| | ||||||| || Sbjct 3285193 GTGATGATTTTGGCCACATCATGAAGTTTTTGGAAGTCATACCAGATTCCATCACCAGTA 3285134 Query 76257 TC----AC-AAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGC 76311 | || |||| ||| || | ||| || ||||| || || || ||| | | Sbjct 3285133 GCTTCTACGAAACGCGGCAAG-GCCAGAGAGGCAAGATTGCACACTGCAGTCTCCTCTGG 3285075 Query 76312 ATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTG 76371 | || | | ||||| ||| || || ||||||| || ||||| ||||| Sbjct 3285074 GGACGAGTACTCAACGATCTCGCAGCAAAGGTTTGATGACTTGATCGTACCAAGGTTTTG 3285015 Query 76372 TTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAAT 76431 || || || ||| || | |||||||| || | ||| || |||||||| ||| | Sbjct 3285014 CTGATTAGATTTGCGGTTGCAGGCATCCTTATACAGCATAAATGGGGTTCCAGTCTCAGT 3284955 Query 76432 CTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATTATAGATTTGTATCGCT 76490 || | || ||||| || | ||| | | ||| |||||| || | | | | | || Sbjct 3284954 TTGAGCCTCTATAATGGAATACCATA-GCTTCTGAGCTTTAATGGT-GCGACG-ACCTCT 3284898 Query 76491 TCTCTC--TTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAA 76548 | ||| |||||||| ||||| | ||| || || || || |||||||| | Sbjct 3284897 GCCCTCCTTTTCATATGTCGTATAAAGTTTTTCGAACTCCTCACCGTAAACATCAGAGAG 3284838 Query 76549 ACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCAT 76608 ||| || || ||||| |||||||| | | ||| || |||| || || ||||| | ||| Sbjct 3284837 ACCTGGGCACTCATTGGGACACATTAGAGTCCAGTCCCCATTATCTTTCACCCGCTGCAT 3284778 Query 76609 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCC 76668 ||| | || || ||||| || |||| || | ||| |||| | | ||||| || || Sbjct 3284777 AAATAAGTCGGGAATCCAAAGTGCAACGAAAATATCACGGGCACGAATCTCTTCCTTACC 3284718 Query 76669 TGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 76728 |||||| | ||| | | || | ||||||| |||||| || || | ||| || Sbjct 3284717 ATGATTCTTGCGCACATCAATGGTATCAAAAATATCATCATGCCACGGCTCAATATACAT 3284658 Query 76729 CGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATA 76788 ||| | |||| ||||| || ||||| || || || | ||| | ||||| ||||| || Sbjct 3284657 CGCAAAGGCACCAGGTCGCTTGTTACCACCTTGGTCAACATAGCGAGCAGTATTATTGTA 3284598 Query 76789 AACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCC 76848 || | |||||| ||||||| || || || ||||||||||| |||| || ||| || Sbjct 3284597 GACACGCAACATGGGAATAAGCCCATTGGAAGTACCATTTGTACCAGCGATGTAAGAGCC 3284538 Query 76849 ACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGC 76908 |||||||| || |||| ||||| |||||||| || | || || || | || Sbjct 3284537 CGTGGCACGAATGTTGTGAATACTGAGGCCAATTCCTCCGGCATTCTTTGAAATCAAGGC 3284478 Query 76909 ACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCAT-GTTAAGAAGAA 76967 ||| || | || |||||||| || || |||||||||||| |||| |||| ||||| Sbjct 3284477 ACATTCCTTGAGCGTATCATAGATACCATCAATACTATCATCCTTCATCGTTACCAAGAA 3284418 Query 76968 AACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAG 77027 ||| ||||||||| | | |||||||||||| | | || ||| |||||| Sbjct 3284417 G-CAGGAAGACATTTGTGGCTTTGGAGTTCCTGCATTGTAGAGGGTTGGACTGGCATGAA 3284359 Query 77028 TGAACCATTTTTCAGAAAGTAGATT-GTATGTTTCAATAACTGCTTCTATATCCCATTGA 77086 |||| |||||| || | | ||| ||| ||||| | ||| ||| |||||| | Sbjct 3284358 TGAAGTATTTTTGTGACA-TCCATTGGTAGGTTTCGAGAACAGCTGGGATATCCTCGCCA 3284300 Query 77087 TGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTC---TACAGTCTTATTA 77143 || || || || || || | ||| | ||| |||||||||| ||| ||| |||| | Sbjct 3284299 TGGATACCCACGGCAACTCTCATTATCATGTGCTGAGGTCTTTCCCATAC---CTTACCA 3284243 Query 77144 TTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 77203 || |||| || ||||||| ||||| || || || || || | ||| | ||| Sbjct 3284242 TTATACTTCAGCAGGTATGATCGCTCCAATGTCTTGAATCCGAAGAAATTGAAATTGAAG 3284183 Query 77204 TCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCATG 77263 |||| || || | || |||| ||||||| || | || ||| | |||| Sbjct 3284182 TCTCGATCATACACTATTGCCGAGTTTAGTTCCTCAGCGTGCTTCACGACAGT-GCCAT- 3284125 Query 77264 ACAG-TGGT-AGAAATAATTGGAGATCGTATTCC----ATTTTTAGGATTAACATAGTTA 77317 | || | | || || |||||| ||| || ||| |||||||| || | | Sbjct 3284124 AGAGCTCCTCCGATATCATTGGA----CTATGCCGGCGGTTTCGCGGATTAACGTATTCA 3284069 Query 77318 AATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACG 77377 | | |||| ||| || ||||||||| | ||||| || | |||||| || ||||| || Sbjct 3284068 TAAAGATCTTTCATAACCTCGCTAAATTGCTTTTTCGTCTGCTTGTGCAGGTTCGAAACA 3284009 Query 77378 GCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGT-GGCTGCTAT 77436 || || | ||| || |||| ||||| ||||| || ||||| || | || || | Sbjct 3284008 GCGATACGAGCTGCAAGAACGGCATAATCAGGGTGAACGGTAGT-CATATAAGCAGCAGT 3283950 Query 77437 TTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATA 77481 ||| || |||| | |||| ||| | || | |||||||| || Sbjct 3283949 TTCGGCAGCTAGGTTGTCTAGTTCAACTGTGGATACTCCGTTGTA 3283905 >seq2 Length=2231275 Score = 107 bits (118), Expect = 3e-18 Identities = 399/622 (64%), Gaps = 14/622 (2%) Strand=Plus/Plus Query 46630 CATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGC 46689 ||||||||||| || | || ||||||| || | || ||||| || || ||| Sbjct 2160491 CATGCAAAATCGGTGTGCATACCCTCATCTCGTGAGATGAGCTCATTAGAGAACGTCAGC 2160550 Query 46690 CCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAAT 46749 |||||||| || ||||| || |||||||| || || | |||||||| ||| ||||| Sbjct 2160551 CCAGGCATGAGACCACGTTTCTTGAGCCAGAAAATGGATGCGAAAGACCCACTGAAGAAG 2160610 Query 46750 ATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATC---ATTATGA 46806 | ||| || | ||||| || |||||||| | ||| | || | | || | | Sbjct 2160611 ACGCCCTCAATGGCCGCAAAAGCGACAAGACGCTCAGCAAAAGTAACGTCTCTGTCGTTG 2160670 Query 46807 ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGG---CATTGTT-TCTATAGC 46862 ||||| | ||||||| || ||||| || | | || || |||| || || || Sbjct 2160671 ATCCAGCGAAGAGCCCAGTCGGCCTT----CTTGCGGATGGGCCCAATGTTATCGATTGC 2160726 Query 46863 ATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATA 46922 |||||| | | | || ||| | ||| |||| ||| ||||| |||| || || Sbjct 2160727 ATTAAACAAATAATTAGCTTCTTTGGGATCCTTAATATAGGTATCAATTAGTAGTGAGTA 2160786 Query 46923 CATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGT 46982 | | || || || || || ||||| ||||| || || ||||| || | || || | Sbjct 2160787 CGTCTCAGAGTGGATATTCTCAATCATTATCTGGAAGCCATAAAAGCACTTAGCCTCGGG 2160846 Query 46983 AATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGC 47042 ||||| || || || || || ||| || || || || || || || || Sbjct 2160847 GATCTGGACGTCGTCACTGAAATTTTGTACCAAGTTTTCGTTGACGATACCGTCGGATGC 2160906 Query 47043 AGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCA---GTTTATT 47099 || ||||| || | ||| | ||| ||||| |||||| | | ||| | | | Sbjct 2160907 CGCGAAAAAGGCAAGCACACGGGAAATGAAATAACGTTCATCAGCATTCATACGATGTTC 2160966 Query 47100 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGC 47159 |||||| | | || || | || | || || || ||||| || ||||||||| Sbjct 2160967 CCAGTCGTGAAGGTCCTTGCCCAGGTCGATCTCCTCGGCGGTCCAAAAACTCGCCTCTGC 2161026 Query 47160 TTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGG 47219 ||||| || | ||| || || | || | |||||| || || ||||| |||| ||| Sbjct 2161027 CTTTTTGTAGTGCTGCCAGATCTCGTGGTACTTGATCGGGAACATCACAAACCTATGTGG 2161086 Query 47220 ATTTTTTGCAAGTATAGGTTCC 47241 || | ||| ||||| ||| Sbjct 2161087 GTTCTCCTTAAGGATAGGCTCC 2161108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934230678080