Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq2 111 4e-19 seq1 96.9 8e-15 >seq2 Length=2231275 Score = 111 bits (122), Expect = 4e-19 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || ||||| || ||||| || ||||||||||| || | | || | ||||| Sbjct 1211828 AGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCC 1211887 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| ||||||||||| | | ||| ||||| | | ||| || ||||| | Sbjct 1211888 TCGAGCTGCTTT--CCGGCGAAGATCAAACGCTGTTGGTCAGGGGGGATACCCTCCTTGT 1211945 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | ||||| || || ||| | || | | | || || ||| || ||||| ||||| | Sbjct 1211946 CCTGAATCTTGCTCTTAACATTGTCGATGGTATCCGAGGACTCAACCTCAAGGGTAATGG 1212005 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || |||||||| ||||| ||||| | |||||| Sbjct 1212006 TCTTACCCGTGAGTGTCTTGACGAAAATCTGCAT 1212039 >seq1 Length=4294417 Score = 96.9 bits (106), Expect = 8e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || ||||| ||||| ||||| || || ||||||||||| | ||||| | ||||| || Sbjct 3810491 ACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGACAAAGTACGGCCATCCTCA 3810432 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || || ||||| || | | ||||||||| | | || || ||||| || ||| Sbjct 3810431 AGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGA 3810372 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || ||| || ||| | || | | || || ||| || || | || || || ||| Sbjct 3810371 ATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCACCTCCAAGGTGATCGTCTTG 3810312 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTT 152106 || || | ||||||||| |||| |||||||| Sbjct 3810311 CCGGTTAAAGTCTTCACAAAGATCTGCATTT 3810281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820519116749