Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq1 183 6e-41
seq2 176 9e-39
>seq1
Length=4294417
Score = 183 bits (202), Expect = 6e-41
Identities = 179/231 (77%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||||||||| || || || || || | ||| || || || |||||||||||||
Sbjct 1826395 ACCACCACGCAGACGCAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGA 1826336
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||||||||| || || || ||||| || |||||||| ||||| || ||
Sbjct 1826335 AAGAGTGCGGCCATCCTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGG 1826276
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| | || || | || ||||||||||| | || ||
Sbjct 1826275 GATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCCGAGGACTCAAC 1826216
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || || || ||||||||||| | ||||||||||| |||||||||||
Sbjct 1826215 CTCAAGGGTAATGGTCTTACCCGTGAGGGTCTTAACGAAAATCTGCATTTT 1826165
Score = 172 bits (190), Expect = 1e-37
Identities = 176/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| | || ||||| | ||| || || || |||||||| ||||
Sbjct 3810510 ACCACCACGGAGGCGCAAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGA 3810451
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| || ||||||||||| ||||| || || || || ||||| || || |||||| ||
Sbjct 3810450 CAAAGTACGGCCATCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGG 3810391
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||||||| || ||||||| || || |||||||||| ||||| | || ||
Sbjct 3810390 AATACCCTCCTTGTCCTGAATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCAC 3810331
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTT 283101
|| | ||||||||||| || || |||||||| || || ||||||||||
Sbjct 3810330 CTCCAAGGTGATCGTCTTGCCGGTTAAAGTCTTCACAAAGATCTGCATTT 3810281
Score = 167 bits (184), Expect = 5e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| | || | || || || | |||| ||| || ||||| ||||||||||
Sbjct 3810737 CCACCACGTAAACGCAAGACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGAG 3810678
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || | || ||||| || || || || ||||||||||| || ||||| ||| |||
Sbjct 3810677 AGAGTCCTACCGTCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGGA 3810618
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
||||| ||||| || || ||||| | || || | || || |||||||||| || |||
Sbjct 3810617 ATACCTTCCTTATCCTGAATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCACT 3810558
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||||||||||||||| ||||| | || |||||||||||||||||
Sbjct 3810557 TCGAGAGTGATCGTCTTTCCCGTGAGGGTTTTAACGAATATCTGCAT 3810511
>seq2
Length=2231275
Score = 176 bits (194), Expect = 9e-39
Identities = 178/229 (78%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || ||||| || || || | ||| || || ||||||||||||||||
Sbjct 1211812 ACCACCACGAAGACGAAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 1211871
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||| |||||||| || || || ||||| ||||||||||| ||||||||| ||
Sbjct 1211872 GAGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGG 1211931
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
|||||||||||||| || ||| ||||| || || | ||||| || ||||| | || |
Sbjct 1211932 GATACCCTCCTTGTCCTGAATC-TTGCTCTTAACATTGTCGATGGTATCCGAGGACTCAA 1211990
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| || || || || ||||||||||| | ||||| ||||| ||||||||
Sbjct 1211991 CCTCAAGGGTAATGGTCTTACCCGTGAGTGTCTTGACGAAAATCTGCAT 1212039
Score = 111 bits (122), Expect = 3e-19
Identities = 131/176 (74%), Gaps = 1/176 (1%)
Strand=Plus/Minus
Query 230229 GGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTG 230288
|| ||||||||| | ||||||| || ||||| ||||||| ||||||||| | |||||
Sbjct 2160372 GGTATGAATGCTAAGCTCATGGATCAGTATATTCAATTCGTTGCTGATCGTTTGCTCGTG 2160313
Query 230289 GCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATT 230348
|| || || ||||||| ||||| || | |||||| |||| || ||||| |||
Sbjct 2160312 GCCCTCGGTAACGAGAAGGTGTACAAGGTTACGAACCCTTTCGACTTCATGGAAAATATT 2160253
Query 230349 TCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCA-AAGGC 230403
|| ||| || || || ||||||||||| || || ||| |||||||| |||||
Sbjct 2160252 TCTCTCGCTGGAAAGACAAACTTCTTCGAGAAACGGGTCTCTGATTATCAGAAGGC 2160197
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738945184426
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |