Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1 183 6e-41 seq2 176 9e-39 >seq1 Length=4294417 Score = 183 bits (202), Expect = 6e-41 Identities = 179/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || || || | ||| || || || ||||||||||||| Sbjct 1826395 ACCACCACGCAGACGCAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGA 1826336 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||||||||| || || || ||||| || |||||||| ||||| || || Sbjct 1826335 AAGAGTGCGGCCATCCTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGG 1826276 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || || | || ||||||||||| | || || Sbjct 1826275 GATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCCGAGGACTCAAC 1826216 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || || || ||||||||||| | ||||||||||| ||||||||||| Sbjct 1826215 CTCAAGGGTAATGGTCTTACCCGTGAGGGTCTTAACGAAAATCTGCATTTT 1826165 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| | || ||||| | ||| || || || |||||||| |||| Sbjct 3810510 ACCACCACGGAGGCGCAAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGA 3810451 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || ||||||||||| ||||| || || || || ||||| || || |||||| || Sbjct 3810450 CAAAGTACGGCCATCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGG 3810391 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| || ||||||| || || |||||||||| ||||| | || || Sbjct 3810390 AATACCCTCCTTGTCCTGAATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCAC 3810331 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTT 283101 || | ||||||||||| || || |||||||| || || |||||||||| Sbjct 3810330 CTCCAAGGTGATCGTCTTGCCGGTTAAAGTCTTCACAAAGATCTGCATTT 3810281 Score = 167 bits (184), Expect = 5e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| | || | || || || | |||| ||| || ||||| |||||||||| Sbjct 3810737 CCACCACGTAAACGCAAGACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGAG 3810678 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | || ||||| || || || || ||||||||||| || ||||| ||| ||| Sbjct 3810677 AGAGTCCTACCGTCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGGA 3810618 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| ||||| || || ||||| | || || | || || |||||||||| || ||| Sbjct 3810617 ATACCTTCCTTATCCTGAATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCACT 3810558 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||||||||||||| ||||| | || ||||||||||||||||| Sbjct 3810557 TCGAGAGTGATCGTCTTTCCCGTGAGGGTTTTAACGAATATCTGCAT 3810511 >seq2 Length=2231275 Score = 176 bits (194), Expect = 9e-39 Identities = 178/229 (78%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || || || | ||| || || |||||||||||||||| Sbjct 1211812 ACCACCACGAAGACGAAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 1211871 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| |||||||| || || || ||||| ||||||||||| ||||||||| || Sbjct 1211872 GAGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGG 1211931 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||||||||||||| || ||| ||||| || || | ||||| || ||||| | || | Sbjct 1211932 GATACCCTCCTTGTCCTGAATC-TTGCTCTTAACATTGTCGATGGTATCCGAGGACTCAA 1211990 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || || || ||||||||||| | ||||| ||||| |||||||| Sbjct 1211991 CCTCAAGGGTAATGGTCTTACCCGTGAGTGTCTTGACGAAAATCTGCAT 1212039 Score = 111 bits (122), Expect = 3e-19 Identities = 131/176 (74%), Gaps = 1/176 (1%) Strand=Plus/Minus Query 230229 GGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTG 230288 || ||||||||| | ||||||| || ||||| ||||||| ||||||||| | ||||| Sbjct 2160372 GGTATGAATGCTAAGCTCATGGATCAGTATATTCAATTCGTTGCTGATCGTTTGCTCGTG 2160313 Query 230289 GCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATT 230348 || || || ||||||| ||||| || | |||||| |||| || ||||| ||| Sbjct 2160312 GCCCTCGGTAACGAGAAGGTGTACAAGGTTACGAACCCTTTCGACTTCATGGAAAATATT 2160253 Query 230349 TCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCA-AAGGC 230403 || ||| || || || ||||||||||| || || ||| |||||||| ||||| Sbjct 2160252 TCTCTCGCTGGAAAGACAAACTTCTTCGAGAAACGGGTCTCTGATTATCAGAAGGC 2160197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738945184426