Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1 145 5e-30 seq2 136 3e-27 >seq1 Length=4294417 Score = 145 bits (160), Expect = 5e-30 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 ||| || |||||||||||| ||||| ||||| ||||| || | ||| | |||| Sbjct 3810723 CAAGACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGAGAGAGTCCTACCGTC 3810664 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 || |||||||| || ||||||||||| ||||| ||||| | ||| | ||||||||| || Sbjct 3810663 CTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGGAATACCTTCCTTATC 3810604 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 | ||||| ||||| | | |||||||| | || ||||| || | || ||||| Sbjct 3810603 CTGAATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCACTTCGAGAGTGATCGT 3810544 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||||||| || ||||| || ||||| Sbjct 3810543 CTTTCCCGTGAGGGTTTTAACGAATATCTGCAT 3810511 Score = 129 bits (142), Expect = 4e-25 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | || ||| ||||| || ||| |||||| || |||||||| || | Sbjct 1826394 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAA 1826335 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || || |||||||| ||||| || ||||||||||| ||||| | || Sbjct 1826334 AGAGTGCGGCCATCCTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGG 1826275 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCA 44288 | || ||||| ||| ||||| ||| || ||| | || ||||| | ||| || | Sbjct 1826274 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT--CAATAGTGTCCGAGGACTCAA 1826217 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| | ||||| ||||| |||||||||||||| ||||| || ||||| Sbjct 1826216 CCTCAAGGGTAATGGTCTTACCCGTGAGGGTCTTAACGAAAATCTGCAT 1826168 Score = 98.7 bits (108), Expect = 7e-16 Identities = 174/252 (69%), Gaps = 5/252 (2%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || | ||| || || || || ||| |||||| || ||||||||||| Sbjct 3810513 CATACCACCACGGAGGCGCAAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATC 3810454 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | | || | || || || ||||| || || || ||||| |||||||| || | Sbjct 3810453 AGACAAAGTACGGCCATCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGG 3810394 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||| ||||| ||| ||||| ||||| | | || || || | || || Sbjct 3810393 TGGAATACCCTCCTTGTCCTGAATCTTTGACTTCACATTATCGATAGTATCCGACGACTC 3810334 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTGAAT 44346 |||||||| || |||||||| || || | |||||||| ||||| ||| || ||||| Sbjct 3810333 CACCTCCAAGGTGATCGTCTTGCCGGTTAAAGTCTTCACAAAGATCTGC---ATTTGAAT 3810277 Query 44347 GAAAATAGCGGT 44358 |||||| ||| Sbjct 3810276 --AAATAGGGGT 3810267 >seq2 Length=2231275 Score = 136 bits (150), Expect = 3e-27 Identities = 158/211 (75%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||| |||||| ||||||||||| || | ||| ||| | || || Sbjct 1211831 ACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCCTCG 1211890 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| |||||||||||||| || || | || | ||| ||||| ||| Sbjct 1211891 AGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGA 1211950 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | ||||| || | ||| || ||||| | ||||| |||| Sbjct 1211951 ATCTTGCTCTTAACATTGT--CGATGGTATCCGAGGACTCAACCTCAAGGGTAATGGTCT 1212008 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | |||||||| ||||| ||||| || ||||| Sbjct 1212009 TACCCGTGAGTGTCTTGACGAAAATCTGCAT 1212039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990316639723