Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq1 145 5e-30
seq2 136 3e-27
>seq1
Length=4294417
Score = 145 bits (160), Expect = 5e-30
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184
||| || |||||||||||| ||||| ||||| ||||| || | ||| | ||||
Sbjct 3810723 CAAGACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGAGAGAGTCCTACCGTC 3810664
Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244
|| |||||||| || ||||||||||| ||||| ||||| | ||| | ||||||||| ||
Sbjct 3810663 CTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGGAATACCTTCCTTATC 3810604
Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304
| ||||| ||||| | | |||||||| | || ||||| || | || |||||
Sbjct 3810603 CTGAATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCACTTCGAGAGTGATCGT 3810544
Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||||||||| || ||||| || |||||
Sbjct 3810543 CTTTCCCGTGAGGGTTTTAACGAATATCTGCAT 3810511
Score = 129 bits (142), Expect = 4e-25
Identities = 167/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||| | || ||| ||||| || ||| |||||| || |||||||| || |
Sbjct 1826394 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAA 1826335
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| | || || |||||||| ||||| || ||||||||||| ||||| | ||
Sbjct 1826334 AGAGTGCGGCCATCCTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGG 1826275
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCA 44288
| || ||||| ||| ||||| ||| || ||| | || ||||| | ||| || |
Sbjct 1826274 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT--CAATAGTGTCCGAGGACTCAA 1826217
Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| | ||||| ||||| |||||||||||||| ||||| || |||||
Sbjct 1826216 CCTCAAGGGTAATGGTCTTACCCGTGAGGGTCTTAACGAAAATCTGCAT 1826168
Score = 98.7 bits (108), Expect = 7e-16
Identities = 174/252 (69%), Gaps = 5/252 (2%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | || | ||| || || || || ||| |||||| || |||||||||||
Sbjct 3810513 CATACCACCACGGAGGCGCAAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATC 3810454
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| | || | || || || ||||| || || || ||||| |||||||| || |
Sbjct 3810453 AGACAAAGTACGGCCATCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGG 3810394
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | ||| ||||| ||| ||||| ||||| | | || || || | || ||
Sbjct 3810393 TGGAATACCCTCCTTGTCCTGAATCTTTGACTTCACATTATCGATAGTATCCGACGACTC 3810334
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTGAAT 44346
|||||||| || |||||||| || || | |||||||| ||||| ||| || |||||
Sbjct 3810333 CACCTCCAAGGTGATCGTCTTGCCGGTTAAAGTCTTCACAAAGATCTGC---ATTTGAAT 3810277
Query 44347 GAAAATAGCGGT 44358
|||||| |||
Sbjct 3810276 --AAATAGGGGT 3810267
>seq2
Length=2231275
Score = 136 bits (150), Expect = 3e-27
Identities = 158/211 (75%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| ||| |||||| ||||||||||| || | ||| ||| | || ||
Sbjct 1211831 ACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCCTCG 1211890
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| |||||||||||||| || || | || | ||| ||||| |||
Sbjct 1211891 AGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGA 1211950
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | ||||| || | ||| || ||||| | ||||| ||||
Sbjct 1211951 ATCTTGCTCTTAACATTGT--CGATGGTATCCGAGGACTCAACCTCAAGGGTAATGGTCT 1212008
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| |||||||| ||||| ||||| || |||||
Sbjct 1212009 TACCCGTGAGTGTCTTGACGAAAATCTGCAT 1212039
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990316639723
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |