Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq1 140 8e-28
seq2 132 1e-25
>seq1
Length=4294417
Score = 140 bits (154), Expect = 8e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| ||||| ||||| ||||| |||||||| ||||| ||||| || |||
Sbjct 3810514 CAGATATTCGTTAAAACCCTCACGGGAAAGACGATCACTCTCGAAGTGGAGTCTTCGGAC 3810573
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || || ||||||||||| || ||||| || ||||| || || ||
Sbjct 3810574 ACCATTGACAATGTGAAGTCCAAGATTCAGGATAAGGAAGGTATTCCTCCTGATCAACAG 3810633
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | ||||| || || || ||||| || || || |||||||| | || || || ||
Sbjct 3810634 CGATTGATCTTTGCTGGTAAGCAGCTTGAGGACGGTAGGACTCTCTCTGACTACAATATC 3810693
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|| || ||||| || || || ||||| |||
Sbjct 3810694 CAGAAGGAATCCACGCTTCACCTTGTCTTG 3810723
Score = 129 bits (142), Expect = 1e-24
Identities = 158/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| ||| | || || || ||||||||| | |||||||| || ||
Sbjct 3810286 CAGATCTTTGTGAAGACTTTAACCGGCAAGACGATCACCTTGGAGGTGGAGTCGTCGGAT 3810345
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || ||||||||||||||| || || || || || ||||||||
Sbjct 3810346 ACTATCGATAATGTGAAGTCAAAGATTCAGGACAAGGAGGGTATTCCACCTGACCAGCAG 3810405
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | || ||||| || || || || || ||||| | ||| | | ||||| ||| |
Sbjct 3810406 CGATTGATTTTCGCTGGTAAGCAACTTGAGGATGGCCGTACTTTGTCTGATTACAACATT 3810465
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|| || || || || |||||||| |||||| | |||
Sbjct 3810466 CAGAAGGAGTCCACTCTGCATCTCGTTTTGCGCCTC 3810501
>seq2
Length=2231275
Score = 132 bits (146), Expect = 1e-25
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || ||||| || || || || ||||| ||||| || ||| ||
Sbjct 1212036 CAGATTTTCGTCAAGACACTCACGGGTAAGACCATTACCCTTGAGGTTGAGTCCTCGGAT 1211977
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || |||||||||||||| || || ||||| || ||||| ||
Sbjct 1211976 ACCATCGACAATGTTAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAACAG 1211917
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||||||||| |||||||| ||||| | || || | || || ||| ||
Sbjct 1211916 CGTTTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACCCTCTCTGACTACAACATC 1211857
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 1211856 CAGAAGGAGTCCACCCTTCACCTCGT 1211831
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730906966686
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |