Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1 150 2e-31 seq2 145 7e-30 >seq1 Length=4294417 Score = 150 bits (166), Expect = 2e-31 Identities = 176/235 (75%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || ||||| | ||| || || || ||| ||||||||||||||| ||||| Sbjct 1826398 ACCACCACCACGCAGACGCAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTC 1826339 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || || ||||| | || ||||||||||| |||||||| |||| |||||||| |||| Sbjct 1826338 AGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGG 1826279 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACT 41810 ||| | | |||||||||| ||| || ||| || | | | |||||| |||| Sbjct 1826278 GGGGATTCCCTCCTTGTCCTGGATCTTGGACTT-GACATTGTCAATAGTGTCCGAGGACT 1826220 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 | ||||| | || || || |||||||| || ||||| |||||||||||||| || Sbjct 1826219 CAACCTCAAGGGTAATGGTCTTACCCGTGAGGGTCTTAACGAAAATCTGCATTTT 1826165 Score = 118 bits (130), Expect = 1e-21 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || || || |||||||| ||| ||||||||||||||| || || || Sbjct 3810509 CCACCACGGAGGCGCAAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGAC 3810450 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || || | || || || ||||| || ||||| |||| ||||| ||||| | ||| Sbjct 3810449 AAAGTACGGCCATCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGA 3810390 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCA-ACGA-CGACACAGTGTCGCTCGACTCC 41812 | | |||||||||| ||| | |||| ||||| | | || | ||| || ||||||| Sbjct 3810389 ATACCCTCCTTGTCC-TGAATCTTTGACTTCACATTATCG--ATAGTATCCGACGACTCC 3810333 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || ||||| || || || | ||||| || || |||||||| Sbjct 3810332 ACCTCCAAGGTGATCGTCTTGCCGGTTAAAGTCTTCACAAAGATCTGCAT 3810283 >seq2 Length=2231275 Score = 145 bits (160), Expect = 7e-30 Identities = 175/233 (75%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || ||||| | || || || || ||| ||||||||| ||||| ||||| Sbjct 1211809 ACCACCACCACGAAGACGAAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTC 1211868 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 ||||||||||| | || ||||||||||| |||||||| |||| ||||||||||| | Sbjct 1211869 AGAGAGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGG 1211928 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTCGCTCGAC 41809 ||| | | |||||||||| ||| | ||||| | ||| | | | || || ||| Sbjct 1211929 GGGGATACCCTCCTTGTCC-TGA-ATCTTGCTCTTAACATTGTCGATGGTATCCGAGGAC 1211986 Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| | || || || |||||||| || ||||| |||||||||||||| Sbjct 1211987 TCAACCTCAAGGGTAATGGTCTTACCCGTGAGTGTCTTGACGAAAATCTGCAT 1212039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303890202800