Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq1 150 2e-31
seq2 145 7e-30
>seq1
Length=4294417
Score = 150 bits (166), Expect = 2e-31
Identities = 176/235 (75%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691
||| || || || ||||| | ||| || || || ||| ||||||||||||||| |||||
Sbjct 1826398 ACCACCACCACGCAGACGCAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTC 1826339
Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751
|| || ||||| | || ||||||||||| |||||||| |||| |||||||| ||||
Sbjct 1826338 AGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGG 1826279
Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACT 41810
||| | | |||||||||| ||| || ||| || | | | |||||| ||||
Sbjct 1826278 GGGGATTCCCTCCTTGTCCTGGATCTTGGACTT-GACATTGTCAATAGTGTCCGAGGACT 1826220
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
| ||||| | || || || |||||||| || ||||| |||||||||||||| ||
Sbjct 1826219 CAACCTCAAGGGTAATGGTCTTACCCGTGAGGGTCTTAACGAAAATCTGCATTTT 1826165
Score = 118 bits (130), Expect = 1e-21
Identities = 168/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || || || |||||||| ||| ||||||||||||||| || || ||
Sbjct 3810509 CCACCACGGAGGCGCAAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGAC 3810450
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| || || | || || || ||||| || ||||| |||| ||||| ||||| | |||
Sbjct 3810449 AAAGTACGGCCATCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGA 3810390
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCA-ACGA-CGACACAGTGTCGCTCGACTCC 41812
| | |||||||||| ||| | |||| ||||| | | || | ||| || |||||||
Sbjct 3810389 ATACCCTCCTTGTCC-TGAATCTTTGACTTCACATTATCG--ATAGTATCCGACGACTCC 3810333
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||||| || ||||| || || || | ||||| || || ||||||||
Sbjct 3810332 ACCTCCAAGGTGATCGTCTTGCCGGTTAAAGTCTTCACAAAGATCTGCAT 3810283
>seq2
Length=2231275
Score = 145 bits (160), Expect = 7e-30
Identities = 175/233 (75%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691
||| || || || ||||| | || || || || ||| ||||||||| ||||| |||||
Sbjct 1211809 ACCACCACCACGAAGACGAAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTC 1211868
Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751
||||||||||| | || ||||||||||| |||||||| |||| ||||||||||| |
Sbjct 1211869 AGAGAGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGG 1211928
Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTCGCTCGAC 41809
||| | | |||||||||| ||| | ||||| | ||| | | | || || |||
Sbjct 1211929 GGGGATACCCTCCTTGTCC-TGA-ATCTTGCTCTTAACATTGTCGATGGTATCCGAGGAC 1211986
Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| ||||| | || || || |||||||| || ||||| ||||||||||||||
Sbjct 1211987 TCAACCTCAAGGGTAATGGTCTTACCCGTGAGTGTCTTGACGAAAATCTGCAT 1212039
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303890202800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |