Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1 260 1e-64 >seq1 Length=1544349 Score = 260 bits (288), Expect = 1e-64 Identities = 569/843 (67%), Gaps = 33/843 (4%) Strand=Plus/Plus Query 101525 TATTTTTCTTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAAT 101584 |||||||| ||||| ||| | ||||| |||| || |||||| | ||| || || | Sbjct 1389774 TATTTTTCCTAAACGCTCATCTTCATTTGAATTTTACCGTGTGGATGATAATTCTCAATC 1389833 Query 101585 ATAATGTCATCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAA-TCTAAGTGT 101643 ||| ||| || ||| || ||||| ||| || || || ||| | ||| ||| Sbjct 1389834 TTAAAGTCTTCAAATTTGAAATCATCGATGTTATCCACTTTCCTTACAATCTTTAACTGT 1389893 Query 101644 TGGAAA-CGGTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACAT 101702 ||||| | || ||||| | |||| || ||| |||||||| | ||||| | Sbjct 1389894 GGGAAATCAGTT--GGAGTCCTACTCAATTGTTCTTTCAGAGCATCCACATGATCCTTGT 1389951 Query 101703 AGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAG 101762 ||||||||||||| || || |||||||| || || | ||| | | || ||||| | Sbjct 1389952 AGATGTGAGCATCACCCATTGTATGGATGAATTCACTAGGTTCCATATCGCACACATGTG 1390011 Query 101763 CAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATAT 101822 ||||||| || ||||| | ||| |||||||| ||||| ||||| |||||||||| Sbjct 1390012 CAATCATCTTGGTCAAAAGTGCGTAGGATGCAATGTTGAATGGAACTCCCAACCCCATAT 1390071 Query 101823 CAGCTGATCTTTGATACAGTTGACAGGAAA------GCTTTCCATCACAG---------A 101867 || ||||| ||||||||| |||| || | |||| || || | | Sbjct 1390072 CACAGGATCTCTGATACAGTAGACATGACAATTTAGGCTTGCCCTCCTTGGGGAAGTTAA 1390131 Query 101868 CATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACAT 101927 | |||||||| ||||| ||||| || || || ||||| |||| ||||| || Sbjct 1390132 CGTAAAATTGTGAAAATACGTGACATGGTGGTAATGCCATTAGTGGAAAGTCTGGCGGAT 1390191 Query 101928 TCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACT 101987 |||| |||| ||| | || || | ||| ||||| |||||| ||||||||| || Sbjct 1390192 TCCACGCACTCATAATAATTCTCCGATCATATGGGTTATTTTTTAATTTATCAATCACCT 1390251 Query 101988 GTTTTAATTGGTCAACTCCTTCTCCTTTATAATCG-CGCCCAACACCTT-TATATTCTGC 102045 || ||||| || | |||| ||| |||||||| || | ||| || | |||| || Sbjct 1390252 CCTTCAATTGATCGAACCCTTGTCCAGTATAATCGTCGTC--ACAGGTTCTGTATTTGGC 1390309 Query 102046 TCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATA 102105 || ||||| ||||| || || || || ||||| ||||| || |||||| |||||| | Sbjct 1390310 ACCAAAATGTCTCCATTGGAAACCGTAGACAGGACCAAGGTCACCTTCACGTCTGTCGTG 1390369 Query 102106 AAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGC 102165 || || | |||||| | | | ||| |||||||| | |||||||| | ||||| | Sbjct 1390370 CAATCCGATTTTATCCAGATACTCTCTGGATCCATTGCCTTCCCAAATTTTAACGCC--C 1390427 Query 102166 TGCT--GATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACA 102223 |||| |||| || || | ||||||| | ||| || ||||| | | ||| || Sbjct 1390428 TGCTCAGATAACTTCTTACCGTCAGTACAACCTGAAATGAACCAGAGTAATTCCAGAATT 1390487 Query 102224 ACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAATTCATTTTC---TAAACTA 102280 | ||| | || ||| |||| |||||||||||||| |||| || || ||| | Sbjct 1390488 ATACCCTTTGTGAACACTTTCTTGGTAGTTAAAAGTGGGAATTGATCATCGGACAAATTG 1390547 Query 102281 AACCTAGACTGTGTT---CCAAAAATACTCAGTGTTCCAGTCCCTGTTCTGTCATTTTTA 102337 || || | |||| | |||| | ||| ||| ||||| || ||||| ||| | || Sbjct 1390548 AATCTCAATTGTGGTGGAGCAAAGAGACTATATGTACCAGTACCGGTTCTATCAGGTCTA 1390607 Query 102338 AAT 102340 ||| Sbjct 1390608 AAT 1390610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361250971057052