Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq7 107 2e-18 >seq7 Length=888749 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || || |||||| | ||| ||| ||||| ||||| || ||||| || |||||| | ||| Sbjct 735832 GACAAGGAAGGTATTCCCCCAGACCAACAGAGACTAATTTTTGCTGGTAAACAATTAGAA 735891 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 || | |||| || | |||||||| |||||||||||||||||||| ||| |||| || Sbjct 735892 GACGGTAGAACTCTGTCTGATTACAACATTCAGAAGGAATCTACTCTGCACTTGGTCTTG 735951 Query 29175 CGATTACGAGGAGG 29188 ||||| |||| || Sbjct 735952 AGATTAAGAGGTGG 735965 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| |||| || | || || ||||| || || ||| || | | Sbjct 735967 ATGCAAATCTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 736026 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | | ||| ||| ||| ||||| || ||| | || ||| ||| Sbjct 736027 GACACCATCGACAACGTCAAGTCAAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCAA 736086 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 |||||||| |||||||| || || ||||| || ||| || ||| || | |||||||| Sbjct 736087 CAAAGACTAATCTTTGCTGGTAAGCAACTTGAGGATGGCAGAACCCTGTCTGATTACAAC 736146 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || ||||||||||||||||| ||| |||| || ||||| |||| || Sbjct 736147 ATCCAGAAGGAATCTACTCTGCACCTGGTTCTAAGATTAAGAGGTGG 736193 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| | || || ||||| || || || |||||| || ||| | | Sbjct 735055 ATGCAGATTTTCGTTAAGACTTTGACTGGTAAGACTATTACCTTGGAGGTTGAATCTTCT 735114 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | ||||| ||| || || || |||||| | || |||||| Sbjct 735115 GATACCATCGACAACGTTAAGTCAAAGATCCAAGACAACGAAGGTATTCCTCCGGATCAA 735174 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || ||| | || ||||| || || ||||||||||| | |||| || | |||||||| Sbjct 735175 CAGAGATTGATTTTTGCTGGAAAGCAACTGGAAGACGGTAGAACTTTGTCTGATTACAAC 735234 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || ||||||||||| ||||||||| |||| || ||||| |||| || Sbjct 735235 ATCCAGAAGGAATCCACTCTTCACTTGGTCTTGAGATTAAGAGGTGG 735281 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| |||| || | || || ||||| || || ||| || | | Sbjct 735283 ATGCAAATTTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 735342 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | | ||| ||| ||| || || |||||| | || || ||| Sbjct 735343 GACACCATCGACAACGTCAAGTCAAAGATTCAGGACAAGGAAGGTATTCCACCCGACCAA 735402 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || ||||| || ||||| || || || ||||||||| || ||| | | ||||||||| Sbjct 735403 CAGAGACTGATTTTTGCTGGTAAGCAGCTGGAAGATGGCAGAACACTATCTGATTACAAT 735462 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || ||||||||||||||||| ||| |||| || || || |||| || Sbjct 735463 ATCCAGAAGGAATCTACTCTGCACTTGGTTCTAAGACTAAGAGGTGG 735509 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || |||||||| | || ||| ||||| ||| | || ||||| || || ||||| || Sbjct 735604 GACAAAGAAGGCATTCCTCCAGACCAACAGAGATTGATTTTTGCAGGTAAGCAACTTGAG 735663 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| || |||| | | |||||||| || ||||||||||||||||||||| |||| || Sbjct 735664 GATGGCAGAACTTTATCTGATTACAACATCCAGAAGGAATCTACTCTTCACTTGGTTCTA 735723 Query 29175 CGATTACGAGGAGG 29188 || || |||| || Sbjct 735724 AGACTAAGAGGTGG 735737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428335728542060