Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq7 96.9 4e-15 >seq7 Length=888749 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || || ||||| ||||| | || ||||| | || Sbjct 735967 ATGCAAATCTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 736026 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| ||| |||| || || ||||| || || | ||||| Sbjct 736027 GACACCATCGACAACG-TCAAGTCAAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCA 736085 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| |||| |||| || || || || || || || | | ||||| || ||||| Sbjct 736086 ACAAAGACTAATCTTTGCTGGTAAGCAACTTGAGGATGGCAGAACCCTGTCTGATTACAA 736145 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || ||||| || || Sbjct 736146 CATCCAGAAGGAATCTACTCTGCACCTGGT 736175 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || || ||||| ||||| | || ||||| | || Sbjct 735283 ATGCAAATTTTCGTCAAGACTCTAACTGGTAAAACTATCACTTTAGAAGTCGAGTCTTCC 735342 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| ||| |||| ||||| || || || || | ||||| Sbjct 735343 GACACCATCGACAACG-TCAAGTCAAAGATTCAGGACAAGGAAGGTATTCCACCCGACCA 735401 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || |||| || | || || || |||||||| || | | || || || ||||| Sbjct 735402 ACAGAGACTGATTTTTGCTGGTAAGCAGCTGGAAGATGGCAGAACACTATCTGATTACAA 735461 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||| | || ||||| Sbjct 735462 TATCCAGAAGGAATCTACTCTGCA 735485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218865107520