Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq7 122 8e-23 >seq7 Length=888749 Score = 122 bits (134), Expect = 8e-23 Identities = 160/218 (73%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 44803 AAAGGCCGAATGGGCGATGAAGTATATTGACGATGAAAAGATAACTTTG-GCCGAACGAT 44861 |||||| |||||||| || | || ||| | |||||| | | |||| || ||| ||| Sbjct 211226 AAAGGCAGAATGGGCCATTAGGTGGATTCAAGATGAAGA-AGCCCTTTATGCTGAAAGAT 211168 Query 44862 TGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTTGCGGCGATATTTT 44921 | |||||||| ||| || ||||| | ||||| || ||| ||| || || || |||| Sbjct 211167 TAGTCGCATTTGCCGCAGTTGAAGGTATCTTCTTCTCAGGGTCTTTCGCTGCCATCTTTT 211108 Query 44922 ACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAATTGATTTCGAGAG 44981 |||| | ||||| ||||||| || || || || ||||||||||||| |||| Sbjct 211107 GGTTGAAGAAGAAGGGTCTGATGCCAGGTCTAACCTTCTCTAACGAATTGATTTGCAGAG 211048 Query 44982 ACGAAGGTCTGCACACCAACTTTGCCTGCCTCTACTAT 45019 |||||||| |||| ||| |||||||||| |||| ||| Sbjct 211047 ACGAAGGTTTGCATACCGACTTTGCCTG--TCTATTAT 211012 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | ||||||||| |||||||| | || || || || || ||||||||||| Sbjct 735283 TACCACCTCTTAATCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAG 735224 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||| | || || || || |||||||| | || | | ||| ||||| |||| Sbjct 735223 ACAAAGTTCTACCGTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGATCCGGAG 735164 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || |||||| || ||| ||||| | |||| ||| || | || | Sbjct 735163 GAATACCTTCGTTGTCTTGGATCTTTGACTTAACGTTGTCGATGGTATCAGAAGATTCAA 735104 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | || || || |||| ||| || || ||||||||||| Sbjct 735103 CCTCCAAGGTAATAGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCAT 735055 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||| | |||| ||| | ||||| || || || ||||||||||| Sbjct 736195 TACCACCTCTTAATCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAG 736136 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || | |||||| || || || ||||| |||| || | || || || |||| Sbjct 736135 ACAGGGTTCTGCCATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAG 736076 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || |||||||| || ||| ||| || || | |||| |||||| | ||||| Sbjct 736075 GAATACCCTCCTTATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGA 736016 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | ||||| || || ||||| || || || || ||||| Sbjct 736015 CTTCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAGATTTGCAT 735967 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | ||||||||| |||||||| | ||||| || || |||||||||||||| Sbjct 735967 TACCACCTCTTAATCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCAG 735908 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||| | || || | ||||| ||||| | || || | ||| || || || | Sbjct 735907 ACAGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGG 735848 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||||||| || || || || | |||| ||| || | || | Sbjct 735847 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCCA 735788 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | || || ||||| ||||| || || ||||| ||||| Sbjct 735787 CTTCCAGAGTGATAGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 735739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830125059984