Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq7 105 8e-18 >seq7 Length=888749 Score = 105 bits (116), Expect = 8e-18 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||||| | | ||||| |||| || ||||| || ||||||||||||| Sbjct 735509 CCACCTCTTAGTCTTAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCAGAT 735450 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || | | || || |||||||||||||| || || |||| ||| ||||||| || Sbjct 735449 AGTGTTCTGCCATCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTGGA 735390 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 43134 | | ||||||||| ||| | |||| |||| ||| | | | |||||| || || | Sbjct 735389 ATACCTTCCTTGTCC-TGAATCTTTGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCGA 735332 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || | ||||| ||||| || ||||| ||||| || || |||||||| Sbjct 735331 CTTCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 735283 Score = 96.9 bits (106), Expect = 4e-15 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||||||| | | |||| |||| || ||||| || || |||||||||| | Sbjct 736193 CCACCTCTTAATCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAGAC 736134 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || | | || || || ||||||||||| || || |||| || ||||| | || Sbjct 736133 AGGGTTCTGCCATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAGGA 736074 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCC-ACCGTGTCGCTCGATTCCA 43134 | | |||||| ||| ||| | |||| |||| ||| | | | |||||| || || | Sbjct 736073 ATACCCTCCTTATCC-TGAATCTTTGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCGA 736016 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || | ||||| ||||| || ||||| ||||| || ||||||||||| Sbjct 736015 CTTCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAGATTTGCAT 735967 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| ||||||| | || ||||| |||| || ||| || || || |||||||||| Sbjct 736422 TCCACCTCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGA 736363 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 |||||| | |||| || | |||||||| || || || | || ||| ||||| | || Sbjct 736362 CAGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGG 736303 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCA 43134 | | ||||||||| ||| |||| | || | | | | | || || ||||||| Sbjct 736302 AATACCTTCCTTGTCC-TGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCA 736244 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || | ||||||||||| || || | || || |||||||||||||| Sbjct 736243 CTTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 736195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817228318560