Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08]
52 sequences; 10,081,862 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq7 158 1e-33
>seq7
Length=888749
Score = 158 bits (174), Expect = 1e-33
Identities = 567/871 (65%), Gaps = 23/871 (3%)
Strand=Plus/Plus
Query 15959 ACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAA 16018
|||||||| ||||||||||| || || || ||| || || ||||||||||| || ||
Sbjct 210744 ACTCTCTTCTCAAAGAAATTGGTCTTACCCGCTAGAGAGATGTTTTCCATAAAGTCGAAT 210803
Query 16019 GGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAATAA-TCTATCCGCCAC 16077
|||||| | | ||||| || ||| | |||| | || | || ||| || || ||
Sbjct 210804 GGATTTGTGACATTGTAGTACTTTTCGT-TACCAAGAGCCACTAGAAGTCTGTCGGCAAC 210862
Query 16078 AAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGATTGC 16137
||||| | || || ||||||| | |||||| || | | || |||| ||
Sbjct 210863 GAATTCGACGTATTGGTTCATTAGCGCGGCGTTCATGCCCAGCAGAGCCACGGGGAGAGC 210922
Query 16138 TTCTGTTAAAAAAttt-ttttCTATATTAACCGCTTCAATGATTATATCTCTTACTACAC 16196
||| | ||| || | ||||| || ||| |||||| | || || | || | |||
Sbjct 210923 ATCT-TCAAAGTATCTCTTTTCAATTGAAACAGCTTCAGTAATAATCT---TTTCCACAA 210978
Query 16197 TATTTA-ACGGAGGGTTTAAT--AAGTGTTTAAACATTATACAAGCAAAATCACAATGCA 16253
||| | || | | | || ||||| || | || ||| ||||| || |||||
Sbjct 210979 TATCTGGACTTGGTCTGTGATTCAAGTGAGCGAATAATAGACAGGCAAAGTCGGTATGCA 211038
Query 16254 ATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTT 16313
| |||||||| || | || || ||||| || || || ||||||||||| || || |
Sbjct 211039 AACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTTAGACCTGGCATCAGACCCTTCT 211098
Query 16314 TTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAA 16373
| || | |||||| || || || || || || || ||||| |||||||||||||||||||
Sbjct 211099 TCTTCAACCAAAAGATGGCAGCGAAAGACCCTGAGAAGAAGATACCTTCAACTGCGGCAA 211158
Query 16374 ATGCAACCAATCGCTCACCGT-ACGTTCTAtttttactttctatccattttttagcccaa 16432
|||| || |||| ||| | | | | || | || | || ||||| | | |||||
Sbjct 211159 ATGCGACTAATCTTTCAGCATAAAGGGCT-TCTTCATCTTGAATCCACCTAATGGCCCAT 211217
Query 16433 tttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATAAtttttttCT 16492
| ||| |||| | | | ||||| || || ||||||||||| ||| ||
Sbjct 211218 TCTGCCTTTTCTCTGATTGGTGGGATGTTTTCAATGGCATTAAATAAGAAATCAGCCTCC 211277
Query 16493 TTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCC 16552
||| || | | || ||||| || | ||| ||| |||| || || || || |||
Sbjct 211278 TTGGAGTCCCTACTGTAGGTATCAATCAACAAAGAGTACGTTTCAGAGTGGATGTTTTCC 211337
Query 16553 ATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAAC 16612
|| || || || || || ||||| | ||||| | ||||| ||||| | | ||
Sbjct 211338 ATCATGATTTGGAACCCGTAGAAGCACTTGGCTTCAGGAATTTGCACTTCGGCAGAGAAG 211397
Query 16613 CTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGT 16672
| || | || || || || || || || ||| || || || ||||| || | |
Sbjct 211398 TTCTCGACCAAATTCTCATTCACAATACCGTCGGATGCAGCGAAGAACGCTAGAACTCTT 211457
Query 16673 TTAAT--AAAAttttt----ttCGTT-ATCTGAAAGTTTTAACCAGTCAGAAAAATCTTT 16725
||| ||||| ||| ||||| |||| ||| | ||||||| ||||| |
Sbjct 211458 GAAATGAAAAATCTTTCACCCTCGTTCATCT---TGTTGT-TCCAGTCATCCAAATCCTG 211513
Query 16726 TGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTCCA 16785
||||||| |||||| | ||||| || || || | || | || || || |||
Sbjct 211514 CTGCAAATCGATTTCTTCTGCTGTCCAGAATGATGCTTCTGCTCTCTTGTAGGCTTGCCA 211573
Query 16786 TATGTCTTCGTAAACAATAGGAAACACAACA 16816
|| || | ||| |||||| || | ||||
Sbjct 211574 GATTTCGTGGTATTGAATAGGGAAAAGAACA 211604
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511699367200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |