Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08]
52 sequences; 10,081,862 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq6 125 6e-24
seq7 116 3e-21
>seq6
Length=915354
Score = 125 bits (138), Expect = 6e-24
Identities = 171/237 (72%), Gaps = 4/237 (2%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||||| |||||||||| ||| ||||| || |||||||||||| |
Sbjct 604728 CCACCTCTCAATCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAC 604787
Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
| ||| | | | || |||| ||| || || || || ||||| | |||||||| || |
Sbjct 604788 AAGGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 604845
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||||||||||||| ||| || ||| || | | |||| | || |
Sbjct 604846 GGATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 604905
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCTC 45344
| || | |||||| ||||| ||||||| |||||| ||||| || ||||| ||| |||
Sbjct 604906 CTTCTAGGGTAATGGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCATCTTGGCTC 604962
>seq7
Length=888749
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||| | |||||| ||||||||||| || ||| ||||| |||||||| || |
Sbjct 736421 CCACCTCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGAC 736362
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| | | |||| |||| ||| || || || || ||||| | ||||||||| |||||
Sbjct 736361 AGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGA 736302
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||| ||||||||| |||||| ||||| | | | || | |||||
Sbjct 736301 ATACCTTCCTTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACT 736242
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||| || || || || || |||| || |||||||||||||||||
Sbjct 736241 TCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 736195
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||| ||||| || ||||||||||| || ||||||||||||||||| || |
Sbjct 735965 CCACCTCTTAATCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGAC 735906
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| | | |||| || | |||||| || || || || | | ||||||||| || ||
Sbjct 735905 AGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGA 735846
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||| |||||||| || || ||| || | | | | || | |||||
Sbjct 735845 ATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCCACT 735786
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||| || || ||||| || || |||||||| || || ||||||||
Sbjct 735785 TCCAGAGTGATAGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 735739
Score = 98.7 bits (108), Expect = 8e-16
Identities = 155/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||||| |||||||||| || ||||| || ||||||||||| |
Sbjct 849269 CCACCTCTCAATCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 849328
Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
| ||| | | | || |||| ||| || || ||||| || || | |||||||| || |
Sbjct 849329 AACGTT--CTACCATCTTCCAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTG 849386
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||| ||||||||| ||| ||| ||| || | | | |||| || |
Sbjct 849387 GGATACCTTCCTTGTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGA 849446
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAA 45327
|||||| || || ||||| || |||| |||||| |||||
Sbjct 849447 CCTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 849486
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||| | ||||| ||||||||||| || |||||||| || ||||| ||
Sbjct 735509 CCACCTCTTAGTCTTAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCAGAT 735450
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
||| | | || ||||| || || || || || |||| | |||||||||||| ||
Sbjct 735449 AGTGTTCTGCCATCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTGGA 735390
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||| ||||||||| ||| ||| ||| || | | | |||| | ||| ||
Sbjct 735389 ATACCTTCCTTGTCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACT 735330
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| | || || || || || || |||||||| || || ||||||||
Sbjct 735329 TCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 735283
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||| ||||||| |||| |||||| || |||||||| |||||||| || |
Sbjct 736193 CCACCTCTTAATCTTAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTGTAATCAGAC 736134
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| | | || || ||||| || || || || || | | |||||||| |||||
Sbjct 736133 AGGGTTCTGCCATCCTCAAGTTGCTTACCAGCAAAGATTAGTCTTTGTTGGTCTGGAGGA 736074
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||||||||| ||| ||| ||| ||| || | | | |||| | ||| ||
Sbjct 736073 ATACCCTCCTTATCCTGAATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACT 736014
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| | || || || || || || |||||||| || |||||||||||
Sbjct 736013 TCTAAAGTGATAGTTTTACCAGTTAGAGTCTTGACGAAGATTTGCAT 735967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395074949621092
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |