Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq6 111 1e-19 seq7 100 2e-16 >seq6 Length=915354 Score = 111 bits (122), Expect = 1e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 ||| || |||| ||| | || ||||| ||||| ||||||||||||| || ||| ||| Sbjct 604739 TCTTAGGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 604798 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 |||||||||||| || || ||| |||| | ||||||||| || || | || ||||| Sbjct 604799 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 604858 Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 || ||| | |||||| | ||| ||||||| | || ||| | ||| || Sbjct 604859 GTCCTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAAT 604918 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 | | || || ||||| || || |||||||| ||||| || Sbjct 604919 GGTCTTACCCGTCAAAGTCTTGACAAAAATCTGCATCTT 604957 >seq7 Length=888749 Score = 100 bits (110), Expect = 2e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 ||| || |||| ||| | || ||||| ||||| ||||||||||| | || ||| ||| Sbjct 849280 TCTTAGAACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAACGTTCTACC 849339 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 |||||||||||| || || || |||| | ||||||||| || || | |||||||| Sbjct 849340 ATCTTCCAATTGCTTACCAGCGAAGATTAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 849399 Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 || ||| | | |||||| | ||| |||||| || ||| || | ||||| Sbjct 849400 GTCCTGAATCTTTGACTTGACGTTGTCAATGGTGTCAGAGGATTCGACCTCCAAAGTGAT 849459 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAA 18317 | | || || ||||| || || |||||| Sbjct 849460 GGTCTTACCAGTCAAAGTCTTGACAAAA 849487 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || | |||||| | |||| ||| || || || ||||| || |||||||| || | Sbjct 736422 TCCACCTCTTAGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGA 736363 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || ||| ||| ||||||||||| || || ||| | || | ||| ||||| || || Sbjct 736362 CAGAGTTCTACCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGG 736303 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | |||||||| || ||||| || || | | | ||| ||| | || Sbjct 736302 AATACCTTCCTTGTCCTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCAC 736243 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | |||||| |||| || ||||| ||||| ||||| |||||||| Sbjct 736242 TTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 736195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343759590740