Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq6 289 4e-73 seq7 179 5e-40 seq3 109 7e-19 >seq6 Length=915354 Score = 289 bits (320), Expect = 4e-73 Identities = 1450/2274 (64%), Gaps = 81/2274 (4%) Strand=Plus/Plus Query 62033 ATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACAT 62092 || ||| || | ||||||||||| | || || |||| || || | | |||||||| Sbjct 272518 ATTCTTATCGATGGTGAATTGAATAGCTGCAGAAGCGGCTTGTGTTCTCAAGTAGTACAT 272577 Query 62093 TCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACT 62152 || || || ||||| |||| ||||| || |||||||| |||| ||| | Sbjct 272578 ACCAGTCTTGAGACCCTTCTTCCAACCGTAGAAGTGCATACTTGTTAATTTACCCATTGT 272637 Query 62153 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 62212 || | || |||||||||| || ||| |||||| ||||| | | | || || Sbjct 272638 GGGGGCACGCATGTGGATATTCAAGGAATGAGATTGATCAATGAACACAGCACGATCAGC 272697 Query 62213 AGCCATTTTTATGATCGTCT-TTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTA 62270 |||||| | || || | | | |||| | ||||||||| | || || || || || || Sbjct 272698 AGCCATGTCTA-GAACATGTCTTTGAGAAATTTCCCACACCGTCTTGTACAAATCT-TTG 272755 Query 62271 ATATCTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTACCA-TAATCCTATT 62326 || |||| ||||| |||| | ||||||||||| ||||| || || |||| | || Sbjct 272756 ATTTCTTGTGGAATATTTGGAATGTTCTGAATGGA---ACCAT-TATCAGTAATGAT-TT 272810 Query 62327 CTTGATCTCATCATTCCAT---AATTTTCTC--TCGGTTAAAAC-TCTAAGGAGATGCGG 62380 ||| | |||| || ||| || | || || ||| | | ||| || | || Sbjct 272811 GTTGTT-TCATACTTTCATCCCAAATACCTAAATCTACCAAATCCTTTAACAAG-TATGG 272868 Query 62381 GTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGG 62440 ||||| | ||||||||| ||||| || || | |||| ||| || ||| || || || Sbjct 272869 ATTAACAATTTGGAATTCACCAGATAAAACACGACGAGAGTACATGTTAGATGTGTAAGG 272928 Query 62441 TTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCAC 62500 ||| | | || || | ||||| ||||| | ||||| ||||| |||||||| ||||| Sbjct 272929 TTCGAAACATTCGTTGTAACCCAAGATTTGTGATGTTGAAGCAGTGGGCATAGGGGCCAC 272988 Query 62501 CAATAAACTATTTCTAAGACCGTATGTTCTGATTTTAT--CTTTTAG--ATG-TTCCCAA 62555 ||||| ||||| | ||| ||||||| || || ||| | ||| ||||||| Sbjct 272989 TAATAATGAGTTTCTTACACC--ATGTTCT---TTAATGCCTTGTCTCAATGGTTCCCAA 273043 Query 62556 TTCCAAAGATCCGACGG-TACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGC 62614 | ||| | || || || | | | | |||||| || ||| | || Sbjct 273044 TCCCATAATTCTGAAGGATTCTTCTCCCAAAGATCAA-ATTGTAAAAGACCTTG---GGA 273099 Query 62615 G-TACG--ATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGC 62671 | || | | ||| |||| ||| ||| | || | ||| || | || |||| Sbjct 273100 GATAGGGGAACCTTCATAGGTAGAATAAGTACCGTGAATCTTGGCCAATTCACAAGATTG 273159 Query 62672 CTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGT-GCTTCCG 62730 || || ||||||| ||||| |||||||| || || || || || || | || || | Sbjct 273160 TTCCAAGGCACCGTGGTAAATAGTTTCAAAAAT-TTGTTGGTTCAATATTTTTGCCTCAG 273218 Query 62731 GGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATAC 62790 | |||||||| | || | ||||| | ||| ||||| || | |||||||| Sbjct 273219 GAGATTCAAATGGCAGACGCAACATCATAAAAGTGTCTGCTAACCCATTAACACCAAGTG 273278 Query 62791 CGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATAT 62850 | ||||||||||||||| |||| || | | ||||| |||| || || || ||| || Sbjct 273279 CAATAGGTCTATGTCTCATATTGGATCTCTTGGCTTCAGGAACTGGGTAGTAGTTACGAT 273338 Query 62851 CTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAA- 62909 | || | || || | ||| | ||| |||| | || || | | |||| |||| Sbjct 273339 CAATGACCTTGTTCAAATTACGTGTAATAGCTTTAGCGACTTCATGTAATTTGGCAAAAC 273398 Query 62910 --TCAAATCGC------CCATCTA-------TTACAAACATGTTC--AATGCAACAGATG 62952 | || | |||||| || || ||| | | ||||| | ||| | Sbjct 273399 TGTACCATTGTTCCTTACCATCTGCCGATACTTCCACACAAGATGGTAATGCGATAGAAG 273458 Query 62953 CCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGAT 63012 | | |||||| || || |||| || | |||| | || ||| || | || Sbjct 273459 CTAAATTACAAACTGCAGTTTCATCCTTGTCAGAGTATTCCACGATTTCACAACATAAAT 273518 Query 63013 TACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 63072 | | | || || || | || | ||| |||||||||| ||||| |||||||||| Sbjct 273519 TGGAAGATTTAATCACACCAAGGTTCTTTTGGTTACTCTTTTCATTACATGCATCCTTAT 273578 Query 63073 AAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC 63132 | || ||||| || |||||||||||| | || | ||||| ||| || | ||| | | Sbjct 273579 AGAGCATGAAAGGTGTACCAGTTTCAGTTTGTGCTTCTAAAATGGCATACCACAACTTTT 273638 Query 63133 GAGCCTTTATTATAGATTTGTATCTC--CTTTCTCTTTCGTATAGAGTATACAATCGTTC 63190 |||| | ||| | ||| || | | | |||| ||| || | |||||| ||| Sbjct 273639 GAGCTCTAATTGTC--TTTCTACCACGGCCTTCTTGTTCATAACGTTCGTACAATTTTTC 273696 Query 63191 GAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCA 63250 || || || || | |||| | || | |||| |||| ||| | | | | ||| Sbjct 273697 AAATTCTTCACCATATACATCTGCTAAACCAGGAGCTTCACTTGGAGAGAAAAGTGTCCA 273756 Query 63251 CTCTCCGTCATCCTTC---ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63307 ||| |||| ||| || |||||||| || | |||||||||||| | ||| || Sbjct 273757 TTCT---TCATTCTTTTCGACACGTTTCATGAACAAATCAGGAATCCATAATGCTGGGAA 273813 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 || |||||||| | | ||| || || || |||||| | | ||| | ||| | | Sbjct 273814 TAAATCTCTTGCACGAATTTCTTCTTTACCATGGTTCTTTCTGATATCAATGAAATCAAA 273873 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 ||||| || ||||| |||||||| || | ||| | ||||||| | || || || || Sbjct 273874 GATATCTGAGTGCCATGGTTCCAAATAAAGGGCGAATGCTCCAGGTCTCTTATTGCCACC 273933 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 ||||| | || | || ||||| ||| |||| | | |||||| || | ||| || || Sbjct 273934 TTGATCCACATAACGTGCAGTGTTGTTAAAAACACGAACCATTGGGATTAAACCATTGGA 273993 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACC 63547 ||||||| ||||| | || || || | | |||||| ||| ||| | || Sbjct 273994 AGTACCATTAGTACCTGCAATGTAAGAACCCGTAGAACGAATGTTATGAATATGCAACCC 274053 Query 63548 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTC 63607 || || || || | || || || | || ||| |||||| | ||||| || ||||| Sbjct 274054 AATACCACCAGCAGTCTTGGAAATCATGGCACATTCTTTTAATGAATCATAAATACCTTC 274113 Query 63608 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCC 63667 ||| ||| || |||| | || ||||| | |||||| || | | ||| || Sbjct 274114 AATGGAATCGTCTTTCATCGCCACAAGGAAACAAGATGCCATTTGTGGATGTGGAGTACC 274173 Query 63668 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA--GAAAGTAGATTGTAC 63725 ||||| || | || |||||||| || | || || ||| || | | |||||| Sbjct 274174 TGCATTGAAAAGAGTTGGAGAAGCATGGATGAA--ATACCTCAATGACATCAAATTGTAA 274231 Query 63726 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63785 || || || || || | ||||| |||||| || | || | ||||| | Sbjct 274232 GTTTCGATCGCAGATTTGATATCTTCACCATGAATACCCAAACTAACTCTCATTATTAGA 274291 Query 63786 TGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63845 || || ||||| ||| || | || || | |||||||| || ||| ||||| Sbjct 274292 TGTTGTGGTCTCTCAGCAGTCAACCCATTGATCCTTAACAAGTAAGAACGTTCTAAAGTC 274351 Query 63846 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTA 63905 || ||||| ||||| ||| || || |||| ||||| | |||| | || || | | | Sbjct 274352 TTGAAACCGAAATAATTGAATTGGAAATCTCTGTCGTAGACAATAGCTGAGTTCAATTCA 274411 Query 63906 TCCTTATATTTGTTAACTATATCCATGGTAAT---ACTTGAAATAATCGGAGAATGTTTC 63962 ||||| | | |||| || | || ||| | ||||| || || ||||| Sbjct 274412 TCCTTGTTGGTCATAACGATGT---TGAAAATCTCATCAGAAATCATAGGGGAATGGACA 274468 Query 63963 CCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 64022 || || ||||| ||||| | | | | ||| || |||| ||| | || | Sbjct 274469 CCGTTAGCTGGATTCACATAATGGTACAGATCAGAGATTACTTGTGAGAATTGCTTCGTG 274528 Query 64023 GTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGT 64082 |||| |||||| |||||||| | || ||||| |||||||| | || ||||| ||||| Sbjct 274529 GTTTGCTTGTGAAGATTTGAAACAGCAATTCTAGCGGCTAGTGTAGCGTAATCAGGATGA 274588 Query 64083 TGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTAC 64141 || || || || || | |||| ||||||| | | || ||||| || || || || Sbjct 274589 ACAGTGGT-CATGTAAGCACATGTTTCAGCTGCCAAATTATCTAATTCCACTGTAGTAAC 274647 Query 64142 TCCATTATATATTCCTTGAATAACCTTCATAGCTATTTTAATAGGATCTATATGATCCGT 64201 || | || | || ||||| | || || || | || ||||||||| | Sbjct 274648 ACCTTCGTAGACACCAGAAATAATACGCTGAGTAATCTTGACAGCGTCTATATGAGAAGG 274707 Query 64202 GTTTAAGCCATAGCACAATTTTCTAATACGAGACGTGATTTTATCAAACATGAC 64255 | ||| |||||||| || || ||||| | || || ||||| || |||| Sbjct 274708 ATCTAACCCATAGCATAACTTCGATATACGTGCTGTAATCTTATCGAATCTGAC 274761 >seq7 Length=888749 Score = 179 bits (198), Expect = 5e-40 Identities = 400/594 (67%), Gaps = 10/594 (2%) Strand=Plus/Plus Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640 ||| || || ||| |||| ||| |||||||| | ||| ||||||||||| || || || Sbjct 211019 ACAGGCAAAGTCGGTATGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTTAG 211078 Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700 || ||||| || || ||| || | |||||| |||| |||||| || || || ||||| Sbjct 211079 ACCTGGCATCAGACCCTTCTTCTTCAACCAAAAGATGGCAGCGAAAGACCCTGAGAAGAA 211138 Query 33701 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGC-GCT--GTCATG 33757 ||| ||||| ||||| ||||| || | | ||| || ||||| ||| || || || Sbjct 211139 GATACCTTCAACTGCGGCAAATGCGACTAATCTTTCAGCATAAAGGGCTTCTTCATCTTG 211198 Query 33758 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33817 |||||| | ||||| || ||||| | | | | || || |||| |||||||| Sbjct 211199 AATCCACCTAATGGCCCATTCTGCCTTTTCTCTGATTGGTGGGATGTTTTCAATGGCATT 211258 Query 33818 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33877 ||| | | | || || || || || ||||| ||||| | | ||| | Sbjct 211259 AAATAAGAAATCAGCCTCCTTGGAGTCCCTACTGTAGGTATCAATCAACAAAGAGTACGT 211318 Query 33878 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33937 ||| || || |||||||| || || || || |||||||| || | || || | ||| Sbjct 211319 TTCAGAGTGGATGTTTTCCATCATGATTTGGAACCCGTAGAAGCACTTGGCTTCAGGAAT 211378 Query 33938 CTGCACTTCTGTACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCATCACTGGCT 33995 |||||||| | | | || ||||| | ||||| |||||||| || || || || Sbjct 211379 TTGCACTTCGGCAGAGAA--GTTCTCGACCAAATTCTCATTCACAATACCGTCGGATGCA 211436 Query 33996 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTC-GTCTGGT--GTTAGTTTATTC 34052 || || ||||| | || | || ||| || |||| || || | || ||| Sbjct 211437 GCGAAGAACGCTAGAACTCTTGAAATGAAAAATCTTTCACCCTCGTTCATCTTGTTGTTC 211496 Query 34053 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 34112 || |||| | ||| | | ||| | |||||| ||||||| |||||||| ||||| Sbjct 211497 CAGTCATCCAAATCCTGCTGCAAATCGATTTCTTCTGCTGTCCAGAATGATGCTTCTGCT 211556 Query 34113 TTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTA 34166 | || || | |||||| || || ||||| || ||||||| |||||||||| Sbjct 211557 CTCTTGTAGGCTTGCCAGATTTCGTGGTATTGAATAGGGAAAAGAACAAATCTA 211610 >seq3 Length=1313108 Score = 109 bits (120), Expect = 7e-19 Identities = 510/796 (64%), Gaps = 24/796 (3%) Strand=Plus/Plus Query 62924 TATTACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCAT--TAGCA 62981 || || |||| || || ||| || || |||||||| ||||| ||| ||||| | | | Sbjct 878657 TACTATAAACGTGGGCAGTGCGACCGAAGCCAGATTGCACACTGCTGTCTCATCTTTGGA 878716 Query 62982 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGT 63041 | ||| | || |||||| ||| | |||| | | || || || || ||||||| | Sbjct 878717 ACT--ATACTCTACAATCTCACAGCATAAATTAGAAGATTTAATGGTACCCAAATTTTTT 878774 Query 63042 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 63101 ||||| || |||||| | |||||| ||||| || || ||| || ||||| | Sbjct 878775 TGATTTGATTTAAAGTTACATGAATCCTTGTAAAGCATAAACGGACCGCCTGTTTCTACT 878834 Query 63102 TGAGATTCTATAATCGCTTTCCAGACGAC----TC-GAGCCTTTATTA--TAGATTTGTA 63154 || | || || ||| | ||||| || || |||| || | | ||| ||| Sbjct 878835 TGGGCTTGTAGAAT-----TTCAGACCACAGCTTCTGAGCTTTGACACGTTTCATTGGTA 878889 Query 63155 TCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 63214 ||| | ||| ||| | ||| | |||||||| | || | |||| Sbjct 878890 ATTCCGTGGA--TTCATATTGTTCATATAGCTCCTCGAACTCTTTGCCGTAGACATCACT 878947 Query 63215 CAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63274 | | || |||||| |||| | | ||||| ||||||| | || || ||||| Sbjct 878948 TAGGCCCGGTGCTTCATCTGGACTGAAAAGAGACCAATCTCCGTTAGACTGTACGCGTTT 879007 Query 63275 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTT 63334 ||| || | ||| || ||||| || || || |||| |||||| | ||| ||| || || Sbjct 879008 CATGAACAAATCTGGTATCCATAGTGCAATGAATAAATCTCTGGCTCTCAATTCATCCTT 879067 Query 63335 TCC-TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63393 || || || || |||| | | || | | || ||| |||||||| ||||||| | Sbjct 879068 ACCATGGTTTTTTCTTAATTGCAAAAAAT-CAAAAACATCTGAATGCCAGGGTTCCAGAT 879126 Query 63394 ATATGGCCATAA-CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 63452 |||| | || | || || || |||||||||||||| |||| |||||||| || ||| Sbjct 879127 ATATA-CAGTATGCACCTGGACGCTTGTTTCCTCCCTGGTCTACATATCTAGCCGTATTA 879185 Query 63453 TTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAG 63512 || |||| | | ||| || || | || | || |||||||| | || || | ||| Sbjct 879186 TTGAAAACACGAAGCATGGGGATTAGTCCACTAGAAATACCATTAGATCCCGATACATAA 879245 Query 63513 CCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 63572 | ||| | || | || ||| | | | ||| ||||| |||| || ||||| Sbjct 879246 GCCCCATTCGCCCTTATGTTAGAAGCATAAATACCAATTCCACCTGAAGCCTTGGAGATA 879305 Query 63573 AATGC-GCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAG 63631 | || | ||| | || || |||| || || || ||| || |||| || Sbjct 879306 AGAGCTGTATC-ATGCAATGTTCGGAAGATTCCATCAATAGAATCCTCTTTCATACCAAC 879364 Query 63632 TAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 63691 |||||||||| ||| | | ||| | ||||| || ||||| || || || || || Sbjct 879365 TAGAAAACAGGAAGAAAGATATTGATTAACTGTTCCTGCGTTAAACAATGTGGGCGATGC 879424 Query 63692 GTGCGTAAACCATTTT 63707 || |||| ||||| Sbjct 879425 ATGAATAAAGTATTTT 879440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817190618560