Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq6 203 3e-47 seq3 122 8e-23 seq7 120 3e-22 >seq6 Length=915354 Score = 203 bits (224), Expect = 3e-47 Identities = 417/620 (67%), Gaps = 0/620 (0%) Strand=Plus/Plus Query 37930 TATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACAC 37989 || ||||| | ||| || | || ||||||| ||| || ||| ||| | |||| | Sbjct 273686 TACAATTTTTCAAATTCTTCACCATATACATCTGCTAAACCAGGAGCTTCACTTGGAGAG 273745 Query 37990 ATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAAT 38049 | || | ||||||||||| ||||| || |||| ||| || |||||||| | ||||||| Sbjct 273746 AAAAGTGTCCATTCTTCATTCTTTTCGACACGTTTCATGAACAAATCAGGAATCCATAAT 273805 Query 38050 GCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGA 38109 || | ||||||||| | | | | |||||| || || |||||||| | | Sbjct 273806 GCTGGGAATAAATCTCTTGCACGAATTTCTTCTTTACCATGGTTCTTTCTGATATCAATG 273865 Query 38110 AAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTA 38169 ||||| || ||||| | |||||||||||| | ||||| | | |||||| ||||| ||| Sbjct 273866 AAATCAAAGATATCTGAGTGCCATGGTTCCAAATAAAGGGCGAATGCTCCAGGTCTCTTA 273925 Query 38170 TCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATA 38229 | || || |||| | ||| | | ||||| ||| | | | | ||| || | || | Sbjct 273926 TTGCCACCTTGATCCACATAACGTGCAGTGTTGTTAAAAACACGAACCATTGGGATTAAA 273985 Query 38230 CCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATC 38289 ||||| || | || || |||| | || |||| |||| ||| || || ||| || Sbjct 273986 CCATTGGAAGTACCATTAGTACCTGCAATGTAAGAACCCGTAGAACGAATGTTATGAATA 274045 Query 38290 GACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAAT 38349 ||| || || ||||| ||| || || || | || |||| |||||| | |||| | Sbjct 274046 TGCAACCCAATACCACCAGCAGTCTTGGAAATCATGGCACATTCTTTTAATGAATCATAA 274105 Query 38350 ATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAAT 38409 |||||||| || || || || || | | | |||||| | |||||| || | Sbjct 274106 ATACCTTCAATGGAATCGTCTTTCATCGCCACAAGGAAACAAGATGCCATTTGTGGATGT 274165 Query 38410 GGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAA 38469 ||||| || || || || | || ||||| ||||| ||||| | | |||| || Sbjct 274166 GGAGTACCTGCATTGAAAAGAGTTGGAGAAGCATGGATGAAATACCTCAATGACATCAAA 274225 Query 38470 TTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATT 38529 || || ||||| || || | ||||| | || |||||||| | | || |||||| Sbjct 274226 TTGTAAGTTTCGATCGCAGATTTGATATCTTCACCATGAATACCCAAACTAACTCTCATT 274285 Query 38530 AGCATATGTTGTGGTCTTTC 38549 | | |||||||||||| || Sbjct 274286 ATTAGATGTTGTGGTCTCTC 274305 Score = 141 bits (156), Expect = 9e-29 Identities = 504/779 (65%), Gaps = 9/779 (1%) Strand=Plus/Plus Query 36796 GTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGC 36855 ||||||| |||| || || | || |||||||| || ||||| ||||| || || Sbjct 272531 GTGAATTGAATAGCTGCAGAAGCGGCTTGTGTTCTCAAGTAGTACATACCAGTCTTGAGA 272590 Query 36856 CCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATA 36915 ||| |||| ||||| || |||||||| || | ||| | ||| || | || Sbjct 272591 CCCTTCTTCCAACCGTAGAAGTGCATACTTGTTAATTTACCCATTGTGGGGGCACGCATG 272650 Query 36916 TATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAA 36975 | || ||| || ||| |||||| || ||| || | | || || ||||| |||| | Sbjct 272651 TGGATATTCAAGGAATGAGATTGATCAATGAACACAGCACGATCAGCAGCCATGTCTAGA 272710 Query 36976 ATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAA 37035 | | | ||||||| || ||||| ||||| || || | | ||| || | | ||| | | Sbjct 272711 ACATGTCTTTGAGAAATTTCCCACACCGTCTTGTACAAATCTTTGATTTCTTGTGGAATA 272770 Query 37036 TCTA-AATGTT--GAATAGAACCATTAT--GTAACACAATTGTATTCTTTATGTCATTAT 37090 | | |||||| |||| |||||||||| |||| | |||| | || || | || Sbjct 272771 TTTGGAATGTTCTGAATGGAACCATTATCAGTAATG-ATTTGTTGT-TTCATACTTTCAT 272828 Query 37091 TCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTC 37150 ||| ||| | | || | || | || | || |||||| |||| || || || | Sbjct 272829 CCCAAATACCTAAATCTACCAAATCCTTTAACAAGTATGGATTAACAATTTGGAATTCAC 272888 Query 37151 CAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTAC 37210 ||||||| || | | | || || || || || ||||| | | || || | || Sbjct 272889 CAGATAAAACACGACGAGAGTACATGTTAGATGTGTAAGGTTCGAAACATTCGTTGTAAC 272948 Query 37211 TTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATC 37270 || ||||| ||||| || ||||| ||||| || || | || | ||||| | | Sbjct 272949 CCAAGATTTGTGATGTTGAAGCAGTGGGCATAGGGGCCACTAATAATGAGTTTCTTACAC 273008 Query 37271 CATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTA 37330 ||||| ||||| | | | | | | | |||||||||||| |||| || ||||| Sbjct 273009 CATGTTCTTTAATGCCTTGTCTCAATGGTTCCCAATCCCATAATTCTGAAGGATTCTTCT 273068 Query 37331 ACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAG 37390 ||| | |||| |||||| || ||||| || ||| | | ||| || ||||| Sbjct 273069 CCCAAAGATCAAATTGTAAAAGACCTTGGGAGATAGGGGAACCTTCATAGGTAGAATAAG 273128 Query 37391 GTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGA 37450 |||| ||| || || | ||| ||| ||| | || | | || || ||||| | Sbjct 273129 TACCGTGAATCTTGGCCAATTCACAAGATTGTTCCAAGGCACCGTGGTAAATAGTTTCAA 273188 Query 37451 AAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAAT-GCATAGCCCAATAATATA 37509 |||||||| || ||||||||||| || || ||| ||| | | ||| | ||| Sbjct 273189 AAATTTGTTGGTTCAATATTTTTGCCTCAGGAGATTCAAATGGCAGA-CGCAACATCATA 273247 Query 37510 AACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCT 37568 || || || || || | |||||| | | || ||||||||| || |||| ||||| Sbjct 273248 AAAGTGTCTGCTAACCCATTAACACCAAGTGCAATAGGTCTATGTCTCATATTGGATCT 273306 >seq3 Length=1313108 Score = 122 bits (134), Expect = 8e-23 Identities = 517/804 (64%), Gaps = 46/804 (6%) Strand=Plus/Plus Query 36792 AACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTTTT 36851 ||| || || | |||| | |||||| | || |||||| | ||||||||| |||||||| Sbjct 877742 AACAGTAAACTGAATAGCAGCTGATGCAGCTTGTGTTCTTAAATAATACATCCCAGTTTT 877801 Query 36852 TAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGA----T 36907 || ||| | ||||| | | ||||||||||||||||| |||| | ||| ||| | Sbjct 877802 CAGTCCCTGTTTCCATGCATGAAAATGCATACTGGTCAATTTTCCCATTGTTGGACTCCT 877861 Query 36908 TATCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCA 36967 || | | || | | ||| ||| |||||| || || | |||| || |||| Sbjct 877862 CATGAAAAGATTTAAACTTTG--TGA--TTGATCGATGAATGGTGCTCTATCACGAGCCA 877917 Query 36968 TTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTAT 37027 | || | | | | || | ||||||||||| || || || || | |||||| || Sbjct 877918 TATCAATTAGCGGTCTCTGTGGGATCTCCCAAACGGTCTTGTAGATCTTTTTTATCCAAT 877977 Query 37028 CTGGTAAATCT---AAATGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTATGT 37084 | |||||| || | | ||| | || || |||| | ||||| ||| || | | Sbjct 877978 CCGGTAAACCTTGGACGTTTTGGACGGATCCGTTATCTGCTACAATACGATTTTTCAATT 878037 Query 37085 CATTATTCCACATATTTCTACTTATTAG--TTCTCTCAATAGGTGTGGATTTACAACCTG 37142 | |||| || ||| | | || || | | | | || | | ||| ||| || Sbjct 878038 TTTCATTC--CAAATTCCCAATTGACAGAAATGATTTACCATGTATTGGTTTGCAA--TG 878093 Query 37143 A--AAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGAC 37200 | || || ||| |||||| ||||| | ||| | || ||| |||||||| |||| Sbjct 878094 ATGAATTCACCACTTAATACCCTTCTAGCATAGACGTTTGAAGTCATTGGTTCAAAGGAC 878153 Query 37201 TCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTA 37260 || | | | | ||||| || || |||||||| ||||| || |||| || | | Sbjct 878154 TCCGTGTATCCAAGAATTTGTGAAGTGGATGCAGTGGGCATAGGACCTATAAGCAAAGAA 878213 Query 37261 TTTCTCAATCC---ATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATC------CCAT 37311 ||||||||||| | | | | || || |||| |||||| ||| || | | Sbjct 878214 TTTCTCAATCCTCGACCTTTTTGGATCCTACTTTTGAGTTCACCCCAGTCTTTGTACAAA 878273 Query 37312 AAATC--TGTTGGGTTC-TTTA---ACCACATATCATATTGTAGAATACCTTTACTCGCT 37365 ||||| ||| || |||| ||| | |||| ||||||||| ||||| || ||| Sbjct 878274 AAATCATAGTTATCCTCGTTTAGTCCCCATAGATCAAATTGTAGAAGACCTTGGCTAGCT 878333 Query 37366 GGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCT 37425 || || | | | | || || |||||||| || | ||||| |||| || ||| Sbjct 878334 GGTGAGCCTTGAAAGGTTTCGTAAGGTCCATATTCCTCAGCTAATTCGATCGAAGTTTCG 878393 Query 37426 AGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTC------T 37479 | || |||| || ||||| || || || ||| |||| || | | ||||||| | Sbjct 878394 ATCGCAGCATGGTAGATTGTCTCAAATATCTGTTTATTCAAGACTCTTGCTTCCTGAGAT 878453 Query 37480 TCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATA 37539 ||| || | || ||| ||| | ||| | ||| ||||| ||||||||||| || Sbjct 878454 TCG-TAGGGTATTTGAAGC---ATA--AGAAAGAGATCTGCCAAGCCCTGAACACCAATC 878507 Query 37540 CCTATGGGTCTATGTTTCTTATTA 37563 || |||| || | || ||||| Sbjct 878508 GCTTCTGGTCGATTTCTCATATTA 878531 >seq7 Length=888749 Score = 120 bits (132), Expect = 3e-22 Identities = 555/868 (64%), Gaps = 26/868 (3%) Strand=Plus/Plus Query 11363 TCGAAAAAATTAGTCTTACCTTCTAGTGATATATACTCCATAAAGCTAAAAGGATTATAT 11422 || || ||||| |||||||| |||| || || | ||||||||| || ||||| Sbjct 210753 TCAAAGAAATTGGTCTTACCCGCTAGAGAGATGTTTTCCATAAAGTCGAATGGATTTGTG 210812 Query 11423 ACATTGAAGACTTTTTCACAACCTAACTCTGTTAATAATCTATCTGCGACGAATTCTATA 11482 |||||| || ||||| ||| | | || | ||| || || |||||||| | Sbjct 210813 ACATTGTAGTACTTTTCGTTACCAAGAGCCACTAGAAGTCTGTCGGCAACGAATTCGACG 210872 Query 11483 TACTGAGACATTAAACAACAATTCATACCTATAAGATCCACCGGAATAGCAACTGTCAAA 11542 || || ||||| ||||| || | ||| |||| || | |||| || ||||| Sbjct 210873 TATTGGTTCATTAGCGCGGCGTTCATGCCCAGCAGAGCCACGGGGAGAGCATCT-TCAAA 210931 Query 11543 AACTC-CTTTTCTATATTAACCGCATCAATGATTATCGACGTTATAACTTCCTTAGATGG 11601 || |||||| || ||| || ||| | || ||| | || || | ||| Sbjct 210932 GTATCTCTTTTCAATTGAAACAGCTTCAGTAATAATCTTTTCCACAATATCTGGACTTGG 210991 Query 11602 TGGATGTAAT--AAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCT 11659 | ||| || || || || | || ||| ||||| || ||| |||||||||||| Sbjct 210992 TC--TGTGATTCAAGTGAGCGAATAATAGACAGGCAAAGTCGGTATGCAAACCTTCGTCT 211049 Query 11660 CTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAA 11719 || | || | ||| ||||| || |||| || ||||||| || || || | |||| Sbjct 211050 CTGCAAATCAATTCGTTAGAGAAGGTTAGACCTGGCATCAGACCCTTCTTCTTCAACCAA 211109 Query 11720 AATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACT 11779 || || ||||| || || || || ||||| || || || || || |||||||| |||| | Sbjct 211110 AAGATGGCAGCGAAAGACCCTGAGAAGAAGATACCTTCAACTGCGGCAAATGCGACTAAT 211169 Query 11780 CTTTCTCCATATA--CCTTGTT--GCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTT 11835 ||||| |||| | ||| || || || ||||| | ||||||| || || || | Sbjct 211170 CTTTCAGCATAAAGGGCTTCTTCATCTTGA-ATCCACCTAATGGCCCATTCTGCCTTTTC 211228 Query 11836 TTTTACGCATTCCATTGTTTCTATAGCGTTAAATA--AATGCATTTTTTCTATATTATCT 11893 | | | | || |||| || || ||||||| || || || | || Sbjct 211229 TCTGATTGGTGGGATGTTTTCAATGGCATTAAATAAGAAATCA--GCCTCCTTGGAGTCC 211286 Query 11894 CTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATT 11953 || || ||||| || || ||| ||| |||| || || || |||||||| ||| Sbjct 211287 CTACTGTAGGTATCAATCAACAAAGAGTACGTTTCAGAGTGGATGTTTTCCATCATGATT 211346 Query 11954 TGAAATCCATAGAAACATCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCT 12013 || || || ||||| || || || | | || || || || | || | || | Sbjct 211347 TGGAACCCGTAGAAGCACTTGGCTTCAGGAATTTGCACTTCGGCAGAGAAGTTCTCGACC 211406 Query 12014 AAATTCTCATTTACAATACCATCACTAGATGCA---AAAAATGCTAGTATATGTTTTATA 12070 ||||||||||| |||||||| || |||||| || || ||||| | | || Sbjct 211407 AAATTCTCATTCACAATACCGTC---GGATGCAGCGAAGAACGCTAGAACTCTTGAAATG 211463 Query 12071 AAGTATTTTTCGTCTTTAGTTAAT----TTATCCCAATCATCTAAATCTTTTGATAAATC 12126 || || |||| | | ||| || || | ||| ||||| ||||| | ||||| Sbjct 211464 AAAAATCTTTC-ACCCTCGTTCATCTTGTTGTTCCAGTCATCCAAATCCTGCTGCAAATC 211522 Query 12127 TACTTCTTCAACGGTCCAAAAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATG 12186 | |||||| | ||||| || ||| ||| | || || || |||||| || || Sbjct 211523 GATTTCTTCTGCTGTCCAGAATGATGCTTCTGCTCTCTTGTAGGCTTGCCAGATTTCGTG 211582 Query 12187 ATACTTAATAGGGAAAATAACGAACCTA 12214 || | ||||||||||| ||| || ||| Sbjct 211583 GTATTGAATAGGGAAAAGAACAAATCTA 211610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524495458880