Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq6 306 5e-78 seq3 120 4e-22 >seq6 Length=915354 Score = 306 bits (338), Expect = 5e-78 Identities = 1451/2274 (64%), Gaps = 81/2274 (4%) Strand=Plus/Plus Query 64826 ATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACAT 64885 || ||| || | ||||||||||| | || || |||| || || | | |||||||| Sbjct 272518 ATTCTTATCGATGGTGAATTGAATAGCTGCAGAAGCGGCTTGTGTTCTCAAGTAGTACAT 272577 Query 64886 TCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACT 64945 || || || ||||| |||| ||||| || |||||||| |||| ||| | Sbjct 272578 ACCAGTCTTGAGACCCTTCTTCCAACCGTAGAAGTGCATACTTGTTAATTTACCCATTGT 272637 Query 64946 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 65005 || | || |||||||||| || ||| |||||| ||||| | | | || || Sbjct 272638 GGGGGCACGCATGTGGATATTCAAGGAATGAGATTGATCAATGAACACAGCACGATCAGC 272697 Query 65006 AGCCATTTTTATGATCGTCT-TTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTA 65063 |||||| | || || | | | |||| | ||||||||| | || || || || || || Sbjct 272698 AGCCATGTCTA-GAACATGTCTTTGAGAAATTTCCCACACCGTCTTGTACAAATCT-TTG 272755 Query 65064 ATATCTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTC 65120 || |||| ||||| |||| | ||||||||||| ||| ||| | || || || Sbjct 272756 ATTTCTTGTGGAATATTTGGAATGTTCTGAATGGAACCATTATCAGTAATGAT----TTG 272811 Query 65121 TTGATCTCATCATTCCAT---AATTTTCTC--TCGGTTAAAAC-TCTAAGGAGATGCGGA 65174 ||| | |||| || ||| || | || || ||| | | ||| || | ||| Sbjct 272812 TTGTT-TCATACTTTCATCCCAAATACCTAAATCTACCAAATCCTTTAACAAG-TATGGA 272869 Query 65175 TTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGT 65234 ||||| | ||| ||||| ||||| || || | |||| ||| || ||| || || ||| Sbjct 272870 TTAACAATTTGGAATTCACCAGATAAAACACGACGAGAGTACATGTTAGATGTGTAAGGT 272929 Query 65235 TCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACC 65294 || | | | || || | ||||| ||||| | ||||| ||||| |||||||| ||||| Sbjct 272930 TCGAAACATTCGTTGTAACCCAAGATTTGTGATGTTGAAGCAGTGGGCATAGGGGCCACT 272989 Query 65295 AATAAACTATTTCTAAGACCGTATGTTCTGATTTTAT--CTTTT---AGAGGTTCCCAAT 65349 ||||| ||||| | ||| ||||||| || || ||| | | |||||||||| Sbjct 272990 AATAATGAGTTTCTTACACC--ATGTTCT---TTAATGCCTTGTCTCAATGGTTCCCAAT 273044 Query 65350 TCCAAAGATCCGACGG-TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCG 65408 ||| | || || || | | | ||||| || ||| | || | Sbjct 273045 CCCATAATTCTGAAGGATTCTTCTCCCAAAGATCAAA-TTGTAAAAGACCTTG---GGAG 273100 Query 65409 -TACG--ATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCC 65465 || | | ||| |||| ||| || | || | ||| || | ||||||| Sbjct 273101 ATAGGGGAACCTTCATAGGTAGAATAAGTACCGTGAATCTTGGCCAATTCACAAGATTGT 273160 Query 65466 TCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGT-GCTTCCAG 65524 || || ||||||| ||||| ||||| || || || || || || || | || || || Sbjct 273161 TCCAAGGCACCGTGGTAAATAGTTTCAAAAAT-TTGTTGGTTCAATATTTTTGCCTC-AG 273218 Query 65525 GCTAT-CAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATAC 65583 | || ||||||| | || | ||||| | ||||||||| || | |||||||| Sbjct 273219 GAGATTCAAATGGCAGACGCAACATCATAAAAGTGTCTGCTAACCCATTAACACCAAGTG 273278 Query 65584 CGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATAT 65643 | ||||||||||||||| |||| || | | ||||| |||| || || || ||| || Sbjct 273279 CAATAGGTCTATGTCTCATATTGGATCTCTTGGCTTCAGGAACTGGGTAGTAGTTACGAT 273338 Query 65644 CTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAA- 65702 | || | || || | ||| | ||| |||| | || || | | |||| |||| Sbjct 273339 CAATGACCTTGTTCAAATTACGTGTAATAGCTTTAGCGACTTCATGTAATTTGGCAAAAC 273398 Query 65703 --TCAAATCGCTC------ATCTA-------TTACAAACATGTTC--AATGCAACAGATG 65745 | || | || |||| || || ||| | | ||||| | ||| | Sbjct 273399 TGTACCATTGTTCCTTACCATCTGCCGATACTTCCACACAAGATGGTAATGCGATAGAAG 273458 Query 65746 CCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGAT 65805 | | ||||||||| || |||| || | |||| | || ||| || | || Sbjct 273459 CTAAATTACAAACTGCAGTTTCATCCTTGTCAGAGTATTCCACGATTTCACAACATAAAT 273518 Query 65806 TACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 65865 | | | || || || | || | ||| |||||||||| ||||| |||||||||| Sbjct 273519 TGGAAGATTTAATCACACCAAGGTTCTTTTGGTTACTCTTTTCATTACATGCATCCTTAT 273578 Query 65866 AAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC 65925 | || ||||| || |||||||||||| | || | ||||| ||| || | ||| | | Sbjct 273579 AGAGCATGAAAGGTGTACCAGTTTCAGTTTGTGCTTCTAAAATGGCATACCACAACTTTT 273638 Query 65926 GAGCCTTTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTC 65983 |||| | ||| | ||| || | | |||| ||| || || |||||| ||| Sbjct 273639 GAGCTCTAATTGTC--TTTCTACCACGGCCTTCTTGTTCATAACGTTCGTACAATTTTTC 273696 Query 65984 GAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCA 66043 || || || || | |||| | || |||||| |||| ||| | | | | ||| Sbjct 273697 AAATTCTTCACCATATACATCTGCTAAACCAGGAGCTTCACTTGGAGAGAAAAGTGTCCA 273756 Query 66044 CTCTCCGTCATCCTTC---ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 66100 ||| |||| ||| || |||||||| || | |||||||||||| | ||| || Sbjct 273757 TTCT---TCATTCTTTTCGACACGTTTCATGAACAAATCAGGAATCCATAATGCTGGGAA 273813 Query 66101 TAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 66160 ||||||||| | | | ||| || || || |||||| | | ||| | ||| | | Sbjct 273814 TAAATCTCTTGCACGAATTTCTTCTTTACCATGGTTCTTTCTGATATCAATGAAATCAAA 273873 Query 66161 AATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 66220 ||||| | ||||| |||||||| || | ||| | ||||||| | || || || || Sbjct 273874 GATATCTGAGTGCCATGGTTCCAAATAAAGGGCGAATGCTCCAGGTCTCTTATTGCCACC 273933 Query 66221 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 66280 ||||| | || | || ||||| ||| |||| | | |||||| || | ||||||||| Sbjct 273934 TTGATCCACATAACGTGCAGTGTTGTTAAAAACACGAACCATTGGGATTAAACCATTGGA 273993 Query 66281 TGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACC 66340 |||||||| || || | || || || | | |||||| ||| ||| | || Sbjct 273994 AGTACCATTAGTACCTGCAATGTAAGAACCCGTAGAACGAATGTTATGAATATGCAACCC 274053 Query 66341 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 66400 || || || || | || || || | || ||| |||||| | |||||| || || || Sbjct 274054 AATACCACCAGCAGTCTTGGAAATCATGGCACATTCTTTTAATGAATCATAAATACCTTC 274113 Query 66401 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 66460 || ||| || |||| | || ||||| | |||||| || | ||| || Sbjct 274114 AATGGAATCGTCTTTCATCGCCACAAGGAAACAAGATGCCATTTGTGGATGTGGAGTACC 274173 Query 66461 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA--GAAAGTAGATTGTAC 66518 ||||| || | || |||||||| || | || || ||| || | | |||||| Sbjct 274174 TGCATTGAAAAGAGTTGGAGAAGCATGGATGAA--ATACCTCAATGACATCAAATTGTAA 274231 Query 66519 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 66578 || || || || || | ||||| |||||| || | || | ||||| | Sbjct 274232 GTTTCGATCGCAGATTTGATATCTTCACCATGAATACCCAAACTAACTCTCATTATTAGA 274291 Query 66579 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 66638 || || ||||| ||| | || || || | |||||||| || ||| ||||| Sbjct 274292 TGTTGTGGTCTCTCAGCAGTCAACCCATTGATCCTTAACAAGTAAGAACGTTCTAAAGTC 274351 Query 66639 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTA 66698 || ||||| ||||| ||| || || |||| ||||| | |||| | ||||| | || | Sbjct 274352 TTGAAACCGAAATAATTGAATTGGAAATCTCTGTCGTAGACAATAGCTGAGTTCAATTCA 274411 Query 66699 TCCTTATATTTGTTAACTACATCCATGGTAAT---ACTTGAAATAATCGGAGAATGTTTC 66755 ||||| | | |||| | | || ||| | ||||| || || ||||| Sbjct 274412 TCCTTGTTGGTCATAACGATGT---TGAAAATCTCATCAGAAATCATAGGGGAATGGACA 274468 Query 66756 CCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 66815 || || ||||| ||||| | | | | ||| || |||| ||| | || | Sbjct 274469 CCGTTAGCTGGATTCACATAATGGTACAGATCAGAGATTACTTGTGAGAATTGCTTCGTG 274528 Query 66816 GTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGT 66875 |||| ||||| |||||||| || || ||||||||||||| | || ||||| ||||| Sbjct 274529 GTTTGCTTGTGAAGATTTGAAACAGCAATTCTAGCGGCTAGTGTAGCGTAATCAGGATGA 274588 Query 66876 TGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTAC 66934 || || || || || | |||| ||||||| | | || ||||| || || || || Sbjct 274589 ACAGTGGT-CATGTAAGCACATGTTTCAGCTGCCAAATTATCTAATTCCACTGTAGTAAC 274647 Query 66935 TCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGT 66994 || | || | || |||| | || || || | || ||||||||| || Sbjct 274648 ACCTTCGTAGACACCAGAAATAATACGCTGAGTAATCTTGACAGCGTCTATATGAGAAGG 274707 Query 66995 GTTTAAGCCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAACATGAC 67048 | ||| ||||| ||||| || ||||| | ||| || ||||| || |||| Sbjct 274708 ATCTAACCCATAGCATAACTTCGATATACGTGCTGTAATCTTATCGAATCTGAC 274761 >seq3 Length=1313108 Score = 120 bits (132), Expect = 4e-22 Identities = 389/592 (66%), Gaps = 23/592 (4%) Strand=Plus/Plus Query 65717 TATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCAT--TAGCA 65774 || || |||| || || ||| || || |||||||| || || ||| ||||| | | | Sbjct 878657 TACTATAAACGTGGGCAGTGCGACCGAAGCCAGATTGCACACTGCTGTCTCATCTTTGGA 878716 Query 65775 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 65834 | ||| | || |||||| ||| | |||| | | || ||||| || ||||||| | Sbjct 878717 ACT--ATACTCTACAATCTCACAGCATAAATTAGAAGATTTAATGGTACCCAAATTTTTT 878774 Query 65835 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 65894 ||||| || |||||| | |||||| ||||| || || ||| || ||||| | Sbjct 878775 TGATTTGATTTAAAGTTACATGAATCCTTGTAAAGCATAAACGGACCGCCTGTTTCTACT 878834 Query 65895 TGAGATTCTATAATCGCTTTCCAGACGAC----TC-GAGCCTTTATTA--TAGATTTGTA 65947 || | || || ||| | ||||| || || |||| || | | ||| ||| Sbjct 878835 TGGGCTTGTAGAAT-----TTCAGACCACAGCTTCTGAGCTTTGACACGTTTCATTGGTA 878889 Query 65948 TCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 66007 || | ||| ||| || ||| | |||||||| | || | |||| Sbjct 878890 ATTCCGTGGA--TTCATATTGTTCATATAGCTCCTCGAACTCTTTGCCGTAGACATCACT 878947 Query 66008 CAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 66067 | || || |||||| |||| | | ||||| ||||||| | || || ||||| Sbjct 878948 TAGGCCCGGTGCTTCATCTGGACTGAAAAGAGACCAATCTCCGTTAGACTGTACGCGTTT 879007 Query 66068 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTT 66127 ||| || | ||| || ||||| || || || ||||||||||||| ||| ||| || || Sbjct 879008 CATGAACAAATCTGGTATCCATAGTGCAATGAATAAATCTCTGGCTCTCAATTCATCCTT 879067 Query 66128 TCC-TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGT 66186 || || || || |||| | | || | | || ||| ||||||| ||||||| | Sbjct 879068 ACCATGGTTTTTTCTTAA-TTGCAAAAAATCAAAAACATCTGAATGCCAGGGTTCCAGAT 879126 Query 66187 ATATGGCCATA-ACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 66245 |||| | || | || || || |||||||||||||| |||| |||||||| || ||| Sbjct 879127 ATAT-ACAGTATGCACCTGGACGCTTGTTTCCTCCCTGGTCTACATATCTAGCCGTATTA 879185 Query 66246 TTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATT-GGTCCCG 66296 || |||| | | ||| || || | ||| | || ||||||| | ||||| Sbjct 879186 TTGAAAACACGAAGCATGGGGATTAGTCCACTAGAAATACCATTAGATCCCG 879237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172372187680