Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq7 154 1e-32 >seq7 Length=888749 Score = 154 bits (170), Expect = 1e-32 Identities = 457/693 (66%), Gaps = 14/693 (2%) Strand=Plus/Plus Query 13596 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13655 ||||| || |||||||| || || ||||| | || || || ||||||||||| || ||| Sbjct 210744 ACTCTCTTCTCAAAGAAATTGGTCTTACCCGCTAGAGAGATGTTTTCCATAAAGTCGAAT 210803 Query 13656 GGATTTATTGACATA--AACACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGCAA 13713 |||||| | ||||| | ||||| || ||| || | | ||| | ||| || |||| Sbjct 210804 GGATTTGT-GACATTGTAGTACTTT-TCGTTACCAAGAGCCACTAGAAGTCTGTCGGCAA 210861 Query 13714 TAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 13773 || || | ||||| ||||| | ||||| || | || || || | Sbjct 210862 CGAATTCGACGTATTGGTTCATTAGCGCGGCGTTCATGCCCAGCAGAGCCACGGGGAGAG 210921 Query 13774 TATTGGTTAAAAAT-TCT-TTTTCTATAGACACAGCCTCTTTTATAATAATTGTAATAAT 13831 || || ||| | ||| ||||| || || ||||| || | ||||| || | ||| Sbjct 210922 CATC--TTCAAAGTATCTCTTTTCAATTGAAACAGCTTCAGTAATAATCTTTTCCACAAT 210979 Query 13832 CTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAG 13891 || | || | || | || || | || ||| ||||| || ||| | Sbjct 210980 ATCTGGACTTGGTCTGTGATTCAAGTGAGCGAATAATAGACAGGCAAAGTCGGTATGCAA 211039 Query 13892 GCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttt 13951 || || ||||| | ||| | |||||| || || |||| |||||||||| || || Sbjct 211040 ACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTTAGACCTGGCATCAGACCCTTCTT 211099 Query 13952 ttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14011 || |||||||| || ||||| || ||||| || ||||| || || |||||||| ||||| Sbjct 211100 CTTCAACCAAAAGATGGCAGCGAAAGACCCTGAGAAGAAGATACCTTCAACTGCGGCAAA 211159 Query 14012 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCATTTTCTAGCCCATT 14070 || | ||||| ||| || | |||| || | | || ||||| | | ||||||| Sbjct 211160 TGCGACTAATCTTTCAGCATAAAGGGCTTCTTCATCTTGA-ATCCACCTAATGGCCCATT 211218 Query 14071 CAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTT 14130 | | |||| | | || || ||||||| ||||||||||| | || ||| | Sbjct 211219 CTGCCTTTTCTCTGATTGGTGGGATGTTTTCAATGGCATTAAATAAGAAATCAGCCTCCT 211278 Query 14131 T--AGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTC 14188 | ||| | | | |||| |||||||| | || ||| |||||||||| |||||||| Sbjct 211279 TGGAGTCCCT--ACTGTAGGTATCAATCAACAAAGAGTACGTTTCAGAGTGGATGTTTTC 211336 Query 14189 CATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAA 14248 ||| || || || || || ||||| | ||||| | ||| ||||| | | || Sbjct 211337 CATCATGATTTGGAACCCGTAGAAGCACTTGGCTTCAGGAATTTGCACTTCGGCAGAGAA 211396 Query 14249 TCTTTCGGCCAAATTTTCATTAACTATACCATC 14281 | ||| ||||||| ||||| || ||||| || Sbjct 211397 GTTCTCGACCAAATTCTCATTCACAATACCGTC 211429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727688176800