Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08]
52 sequences; 10,081,862 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq7 116 3e-21
>seq7
Length=888749
Score = 116 bits (128), Expect = 3e-21
Identities = 160/221 (72%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951
||||||| ||||| || | ||| ||||| || | ||||||||| || | ||| |
Sbjct 735500 AGTCTTAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAATCAGATAGTGTTCTG 735441
Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011
| || |||| || || || |||||||||| || |||||| |||| || | ||||||
Sbjct 735440 CCATCTTCCAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGGTCGGGTGGAATACCTTCC 735381
Query 43012 TTTTCGCTGATCAACTCT---TTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACC 43068
|| || |||| | || | ||||| || | | |||||| || |||||| ||||
Sbjct 735380 TTGTC-CTGA--ATCTTTGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCTAAA 735324
Query 43069 GTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| |||||||| || |||||||| || || |||||||||||
Sbjct 735323 GTGATAGTTTTACCAGTTAGAGTCTTGACGAAAATTTGCAT 735283
Score = 87.8 bits (96), Expect = 1e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 42894 TCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTC 42953
||| || ||||| || | ||| ||||| || | |||||||| |||| || | |
Sbjct 735954 TCTCAAGACCAAGTGCAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGAGTTCTACC 735895
Query 42954 GTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTT 43013
||| || |||||||| || |||||||| | || |||||| || | || | |||||| ||
Sbjct 735894 GTCTTCTAATTGTTTACCAGCAAAAATTAGTCTCTGTTGGTCTGGGGGAATACCTTCCTT 735835
Query 43014 TTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTAT 43073
|| |||| ||||| || | | || || || || || || | || ||
Sbjct 735834 GTCTTGGATCTTGGACTTGACGTTGTCGATGGTATCAGAAGATTCCACTTCCAGAGTGAT 735775
Query 43074 AGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
||| || ||||||||||| || || |||||||||||
Sbjct 735774 AGTCTTACCGGTTAGAGTCTTAACGAAAATTTGCAT 735739
Score = 86.0 bits (94), Expect = 5e-12
Identities = 152/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951
|||||||| ||||| || | ||| ||| || || | |||||||| |||| || |
Sbjct 736412 AGTCTTAAAACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAATCAGACAGAGTTCTA 736353
Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011
|||| |||||||| || || ||||||||||||| |||||| || | || | ||||||
Sbjct 736352 CCGTCTTCCAATTGCTTACCTGCAAAAATCAATCTCTGTTGGTCAGGAGGAATACCTTCC 736293
Query 43012 TTTTCGCTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGT 43070
|| || ||| || ||| || | | | || || || || || || | ||
Sbjct 736292 TTGTC-CTGAATTTTAGATTTAACATTATCGATAGTATCAGAAGATTCCACTTCCAAAGT 736234
Query 43071 TATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| ||||| || || | ||||||||||| ||||||||
Sbjct 736233 GATGGTTTTACCAGTCAAGGTTTTCACAAAGATTTGCAT 736195
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 42894 TCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTC 42953
||| || ||||| || | |||| ||||| || | |||||||| ||||| || | |
Sbjct 735270 TCTCAAGACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGACAAAGTTCTACC 735211
Query 42954 GTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTT 43013
||| |||| ||| || || ||||||||||||| ||||||||| | || | |||||| ||
Sbjct 735210 GTCTTCCAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGATCCGGAGGAATACCTTCGTT 735151
Query 43014 TTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTAT 43073
|| |||| || || || | | || || || || || || | || ||
Sbjct 735150 GTCTTGGATCTTTGACTTAACGTTGTCGATGGTATCAGAAGATTCAACCTCCAAGGTAAT 735091
Query 43074 AGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
||| || || || | ||| || || ||||| |||||
Sbjct 735090 AGTCTTACCAGTCAAAGTCTTAACGAAAATCTGCAT 735055
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951
||||||| ||||| || | ||| ||||| || | |||||||| || || || |
Sbjct 735728 AGTCTTAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGATAAAGTTCTG 735669
Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011
| || || | ||| || || ||||||||||||| |||||| || | || | ||||||
Sbjct 735668 CCATCCTCAAGTTGCTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATGCCTTCT 735609
Query 43012 TTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTT 43071
|| || |||| |||||| || | | || || || || || || | ||
Sbjct 735608 TTGTCCTGGATCTTAGATTTGACGTTGTCGATAGTATCAGAAGATTCCACTTCCAAAGTG 735549
Query 43072 ATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| || || ||||||||||| || || ||||| |||||
Sbjct 735548 ATGGTCTTACCGGTTAGAGTCTTAACGAAAATCTGCAT 735511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381369358307016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |